Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AC079328.2-201ENST00000561241 3354 ntBASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AC129492.6-201ENST00000611383 1305 ntBASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AL450487.1-201ENST00000426799 995 ntBASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AC005593.1-201ENST00000624894 515 ntBASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 AL353732.1-201ENST00000569618 1459 ntBASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 HARS-204ENST00000438307 1789 ntTSL 2 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
LRRC40Q9H9A6 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AC131009.4-201ENST00000624048 1740 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AC079781.3-201ENST00000449110 356 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 RIN3-211ENST00000557762 517 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AC005412.3-201ENST00000580309 715 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SIGLEC29P-201ENST00000599873 1114 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 FMO5-208ENST00000578284 1784 ntTSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 PPEF2-207ENST00000621010 1797 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AP002414.3-201ENST00000589352 1468 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 CYP2T1P-202ENST00000641596 2535 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 AL139384.1-201ENST00000612143 3047 ntBASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 RAD1-208ENST00000628399 1678 ntTSL 3 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC17.04■□□□□ 0.32
LRRC40Q9H9A6 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 SNX33P1-201ENST00000592116 1762 ntBASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 MOK-208ENST00000519058 917 ntTSL 2 BASIC17.03■□□□□ 0.32
LRRC40Q9H9A6 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms