Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 GATB-205ENST00000508611 605 ntTSL 2 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 AC025678.2-201ENST00000562061 970 ntBASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 AC004449.1-201ENST00000564240 433 ntBASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 AC026120.1-201ENST00000611536 926 ntBASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC20.31■□□□□ 0.84
RPAP1Q9BWH6 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 PCDHB17P-201ENST00000539533 2393 ntBASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 FMNL1-201ENST00000328118 2330 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 TIMM8BP1-201ENST00000452384 211 ntBASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.3■□□□□ 0.84
RPAP1Q9BWH6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 QRFPR-202ENST00000394427 1708 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ICAM4-203ENST00000393717 1390 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 KCNQ2-236ENST00000637193 2983 ntTSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 PUDP-203ENST00000424830 1334 ntTSL 3 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 SFT2D1-201ENST00000361731 1079 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 WDR53-203ENST00000429115 683 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 AC064807.1-203ENST00000520357 575 ntTSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 FAM86C2P-203ENST00000528684 1004 ntBASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 LINC01481-203ENST00000549651 883 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 RAB3D-202ENST00000589655 924 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 LITAF-202ENST00000381810 1527 ntTSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC20.29■□□□□ 0.84
RPAP1Q9BWH6 TOP3BP1-201ENST00000420768 1380 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AL021920.2-201ENST00000624828 1351 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AC092171.3-201ENST00000610122 2651 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AL035633.1-201ENST00000406139 838 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AC005412.3-201ENST00000580309 715 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AC005498.2-205ENST00000593218 784 ntBASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
RPAP1Q9BWH6 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 35.7 ms