Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS2Q99743 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.5■□□□□ 0.23
NPAS2Q99743 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC16.5■□□□□ 0.23
NPAS2Q99743 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
NPAS2Q99743 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 STK24-203ENST00000397517 4578 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 DANCR-204ENST00000444958 709 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 PQLC2L-205ENST00000461040 563 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC16.49■□□□□ 0.23
NPAS2Q99743 AC036176.1-201ENST00000589905 785 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS2Q99743 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC16.49■□□□□ 0.23
NPAS2Q99743 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 AC006460.2-201ENST00000638173 4744 ntTSL 5 BASIC16.49■□□□□ 0.23
NPAS2Q99743 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC16.49■□□□□ 0.23
NPAS2Q99743 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 FRMD8P1-201ENST00000440433 1524 ntBASIC16.49■□□□□ 0.23
NPAS2Q99743 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
NPAS2Q99743 GCLC-213ENST00000616923 3694 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
NPAS2Q99743 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC16.49■□□□□ 0.23
NPAS2Q99743 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS2Q99743 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 AP000347.1-202ENST00000435868 847 ntBASIC16.48■□□□□ 0.23
NPAS2Q99743 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.48■□□□□ 0.23
NPAS2Q99743 AC008608.2-201ENST00000606089 416 ntBASIC16.48■□□□□ 0.23
NPAS2Q99743 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC16.48■□□□□ 0.23
NPAS2Q99743 SHQ1-201ENST00000325599 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC16.48■□□□□ 0.23
NPAS2Q99743 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
NPAS2Q99743 AL391256.1-201ENST00000443260 1855 ntBASIC16.48■□□□□ 0.23
NPAS2Q99743 AL645728.1-201ENST00000366221 2101 ntBASIC16.48■□□□□ 0.23
NPAS2Q99743 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC16.48■□□□□ 0.23
NPAS2Q99743 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 CR392000.2-201ENST00000640235 1994 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
NPAS2Q99743 TRIM27-202ENST00000377199 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.47■□□□□ 0.23
NPAS2Q99743 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
NPAS2Q99743 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 AC105917.1-201ENST00000506637 2539 ntBASIC16.47■□□□□ 0.23
NPAS2Q99743 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
NPAS2Q99743 TCP11L2-203ENST00000547153 1788 ntTSL 2 BASIC16.47■□□□□ 0.23
NPAS2Q99743 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms