Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 CRB3P1-201ENST00000449338 276 ntBASIC19.63■□□□□ 0.73
TRIM47Q96LD4 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 AC026150.2-201ENST00000564693 1156 ntBASIC19.63■□□□□ 0.73
TRIM47Q96LD4 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.63■□□□□ 0.73
TRIM47Q96LD4 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 LINC01451-201ENST00000623792 534 ntBASIC19.62■□□□□ 0.73
TRIM47Q96LD4 AL358472.5-202ENST00000641448 1267 ntBASIC19.62■□□□□ 0.73
TRIM47Q96LD4 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
TRIM47Q96LD4 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 SPDYE14P-201ENST00000442619 822 ntBASIC19.61■□□□□ 0.73
TRIM47Q96LD4 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 LINC01225-203ENST00000563550 1244 ntBASIC19.61■□□□□ 0.73
TRIM47Q96LD4 CD7-202ENST00000578509 925 ntTSL 3 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 AC027307.3-201ENST00000594262 1100 ntBASIC19.61■□□□□ 0.73
TRIM47Q96LD4 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 COL9A1-201ENST00000320755 3059 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
TRIM47Q96LD4 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 NSMF-204ENST00000371473 3556 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 OR8S1-201ENST00000310194 1080 ntBASIC19.6■□□□□ 0.73
TRIM47Q96LD4 ENDOV-201ENST00000323854 1226 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 AL512638.1-201ENST00000457493 794 ntBASIC19.6■□□□□ 0.73
TRIM47Q96LD4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 AC107918.2-201ENST00000530817 355 ntBASIC19.6■□□□□ 0.73
TRIM47Q96LD4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC19.6■□□□□ 0.73
TRIM47Q96LD4 AL359881.2-201ENST00000602973 570 ntBASIC19.6■□□□□ 0.73
TRIM47Q96LD4 AL158211.3-201ENST00000607385 239 ntBASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms