Protein–RNA interactions for Protein: Q96DI7

SNRNP40, U5 small nuclear ribonucleoprotein 40 kDa protein, humanhuman

Known RBP Predictions only

Length 357 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40Q96DI7 TBC1D4-202ENST00000377636 6364 ntAPPRIS P3 TSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 ARSEP1-201ENST00000420443 635 ntBASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC009407.1-201ENST00000568958 598 ntBASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 ACY1-212ENST00000635797 1294 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 TCF25-225ENST00000614813 2047 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.03■□□□□ -0
SNRNP40Q96DI7 RHOBTB1-201ENST00000337910 4473 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
SNRNP40Q96DI7 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AL390961.4-201ENST00000623958 2535 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 BCL2L2-PABPN1-203ENST00000557008 1366 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AC087499.5-201ENST00000452760 1342 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 CD164L2-203ENST00000374030 993 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 HLA-H-201ENST00000383620 1096 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AL353705.2-201ENST00000428243 662 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 U91328.1-201ENST00000437528 223 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 IQCF3-201ENST00000437810 1270 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AC068898.1-201ENST00000440750 335 ntTSL 3 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AC019257.1-202ENST00000521498 445 ntTSL 5 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AP002008.1-201ENST00000530283 1155 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC15.02■□□□□ -0
SNRNP40Q96DI7 AL132655.2-201ENST00000596276 594 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 AC008738.7-201ENST00000609744 511 ntBASIC15.02■□□□□ -0
SNRNP40Q96DI7 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 SERF2-217ENST00000630046 862 ntTSL 5 BASIC15.02■□□□□ -0
SNRNP40Q96DI7 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 LINC00895-201ENST00000629028 1637 ntBASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
SNRNP40Q96DI7 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 PFN2-201ENST00000239940 2261 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 KRT8P49-201ENST00000604166 1432 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 NFKB2-201ENST00000189444 3011 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 GSTO2-203ENST00000450629 1391 ntTSL 5 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AL021920.2-201ENST00000624828 1351 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AC093525.9-201ENST00000624961 1746 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AL353779.1-201ENST00000434793 351 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 TEX28P1-201ENST00000613479 1221 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 TEX28P2-201ENST00000617764 1221 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 AC005332.8-201ENST00000622750 2735 ntBASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
SNRNP40Q96DI7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms