Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
RPGRQ92834 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC20.53■□□□□ 0.88
RPGRQ92834 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC20.53■□□□□ 0.88
RPGRQ92834 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
RPGRQ92834 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
RPGRQ92834 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC20.53■□□□□ 0.88
RPGRQ92834 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC20.52■□□□□ 0.88
RPGRQ92834 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RPGRQ92834 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC20.52■□□□□ 0.88
RPGRQ92834 AC140912.1-201ENST00000577171 1054 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 C1QTNF1-212ENST00000583904 1129 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RPGRQ92834 RNA5-8SN1-201ENST00000610460 153 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 RNA5-8SN5-202ENST00000612463 153 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 RNA5-8SN4-201ENST00000613359 153 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC20.52■□□□□ 0.88
RPGRQ92834 RNA5-8SN5-201ENST00000619471 153 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC20.52■□□□□ 0.88
RPGRQ92834 AC004840.1-201ENST00000636359 365 ntBASIC20.52■□□□□ 0.88
RPGRQ92834 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
RPGRQ92834 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.52■□□□□ 0.88
RPGRQ92834 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPGRQ92834 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC20.52■□□□□ 0.87
RPGRQ92834 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
RPGRQ92834 NOP14-202ENST00000398071 2535 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
RPGRQ92834 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RPGRQ92834 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
RPGRQ92834 GNE-204ENST00000539208 2190 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC20.51■□□□□ 0.87
RPGRQ92834 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 CENPM-206ENST00000407253 818 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 AL353779.1-201ENST00000434793 351 ntBASIC20.51■□□□□ 0.87
RPGRQ92834 AL158198.1-201ENST00000449143 380 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRQ92834 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 AC135586.1-201ENST00000539323 574 ntBASIC20.51■□□□□ 0.87
RPGRQ92834 BANF1P1-201ENST00000553684 263 ntBASIC20.51■□□□□ 0.87
RPGRQ92834 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC20.51■□□□□ 0.87
RPGRQ92834 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC20.51■□□□□ 0.87
RPGRQ92834 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 AL671710.1-201ENST00000610245 2349 ntBASIC20.51■□□□□ 0.87
RPGRQ92834 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
RPGRQ92834 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
RPGRQ92834 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC20.51■□□□□ 0.87
RPGRQ92834 GOLGA2P9-201ENST00000596977 1937 ntBASIC20.51■□□□□ 0.87
RPGRQ92834 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
RPGRQ92834 ZFP64-205ENST00000371518 1841 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
RPGRQ92834 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRQ92834 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 AL390961.4-201ENST00000623958 2535 ntBASIC20.5■□□□□ 0.87
RPGRQ92834 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC20.5■□□□□ 0.87
RPGRQ92834 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRQ92834 API5-211ENST00000534695 560 ntTSL 5 BASIC20.5■□□□□ 0.87
RPGRQ92834 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
RPGRQ92834 AC126696.2-201ENST00000563687 522 ntTSL 3 BASIC20.5■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms