Protein–RNA interactions for Protein: Q92572

AP3S1, AP-3 complex subunit sigma-1, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3S1Q92572 KIF1C-201ENST00000320785 7919 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 FUT8-AS1-201ENST00000621019 1521 ntBASIC14.84□□□□□ -0.03
AP3S1Q92572 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 IPO13-201ENST00000372339 1201 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC14.84□□□□□ -0.03
AP3S1Q92572 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 AC009947.2-201ENST00000444014 672 ntBASIC14.84□□□□□ -0.03
AP3S1Q92572 MTCL1P1-201ENST00000446207 792 ntBASIC14.84□□□□□ -0.03
AP3S1Q92572 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 MLF2-210ENST00000542154 838 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 GRAP-204ENST00000573099 846 ntTSL 3 BASIC14.84□□□□□ -0.03
AP3S1Q92572 USF2-205ENST00000594064 1179 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 PER2-201ENST00000254657 6385 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.84□□□□□ -0.03
AP3S1Q92572 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 TNRC18P2-201ENST00000417666 2714 ntBASIC14.84□□□□□ -0.03
AP3S1Q92572 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 PABPC4-201ENST00000372856 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
AP3S1Q92572 TRMT44-205ENST00000513449 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
AP3S1Q92572 AC006449.6-201ENST00000612330 2296 ntBASIC14.83□□□□□ -0.03
AP3S1Q92572 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 GGT4P-201ENST00000623672 1708 ntBASIC14.83□□□□□ -0.03
AP3S1Q92572 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC14.83□□□□□ -0.03
AP3S1Q92572 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 AIFM2-201ENST00000307864 3243 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 TTC29-201ENST00000325106 1785 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
AP3S1Q92572 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.03
AP3S1Q92572 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC14.83□□□□□ -0.04
AP3S1Q92572 TNS2-201ENST00000314250 5010 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 PRAMEF20-201ENST00000316412 1597 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
AP3S1Q92572 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 AC010460.3-201ENST00000511359 1579 ntBASIC14.83□□□□□ -0.04
AP3S1Q92572 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
AP3S1Q92572 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC14.83□□□□□ -0.04
AP3S1Q92572 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC14.83□□□□□ -0.04
AP3S1Q92572 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC14.83□□□□□ -0.04
AP3S1Q92572 AL512604.3-201ENST00000569583 964 ntBASIC14.83□□□□□ -0.04
AP3S1Q92572 TEN1-204ENST00000588202 862 ntTSL 3 BASIC14.83□□□□□ -0.04
AP3S1Q92572 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 AC104771.1-201ENST00000603335 964 ntBASIC14.83□□□□□ -0.04
AP3S1Q92572 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
AP3S1Q92572 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.83□□□□□ -0.04
AP3S1Q92572 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
AP3S1Q92572 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC14.83□□□□□ -0.04
AP3S1Q92572 SUPT20HL2-201ENST00000486479 2409 ntBASIC14.83□□□□□ -0.04
AP3S1Q92572 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
AP3S1Q92572 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms