Protein–RNA interactions for Protein: Q8WWY6

MBD3L1, Methyl-CpG-binding domain protein 3-like 1, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L1Q8WWY6 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
MBD3L1Q8WWY6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
MBD3L1Q8WWY6 AC097637.2-201ENST00000624096 1997 ntBASIC13.21□□□□□ -0.29
MBD3L1Q8WWY6 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 RIMS3-201ENST00000372683 1408 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC13.21□□□□□ -0.3
MBD3L1Q8WWY6 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 NFATC3-222ENST00000575270 3824 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 BMP1-201ENST00000306349 2626 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AC006486.2-201ENST00000624246 2199 ntBASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 MPL-201ENST00000372470 1908 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 LEKR1-209ENST00000491763 1940 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AC103564.2-201ENST00000432853 1299 ntBASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AC122714.2-201ENST00000502787 707 ntBASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AC006058.3-201ENST00000606217 1069 ntBASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 SOX14-201ENST00000306087 2055 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 HTR1A-201ENST00000323865 1778 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 HARS-203ENST00000431330 1774 ntTSL 2 BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 BFSP2-201ENST00000302334 1558 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
MBD3L1Q8WWY6 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 BX276092.9-202ENST00000636096 1722 ntAPPRIS P5 TSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 GCAT-202ENST00000323205 1656 ntTSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 AC016027.1-202ENST00000607927 1699 ntBASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 ZNF496-201ENST00000294753 5336 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 AC007967.3-201ENST00000434308 558 ntBASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 FADS3-204ENST00000525588 1254 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TMEM258-204ENST00000537328 575 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 AL512604.3-201ENST00000569583 964 ntBASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 POLL-217ENST00000628479 1953 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC13.19□□□□□ -0.3
MBD3L1Q8WWY6 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms