Protein–RNA interactions for Protein: Q8TDI0

CHD5, Chromodomain-helicase-DNA-binding protein 5, humanhuman

Predictions only

Length 1,954 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD5Q8TDI0 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC053503.2-201ENST00000420563 1598 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC079140.1-201ENST00000508039 487 ntBASIC16.84■□□□□ 0.29
CHD5Q8TDI0 GALNT9-208ENST00000541995 1001 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 RPL28-205ENST00000558131 444 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 LINC01225-203ENST00000563550 1244 ntBASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NKG7-205ENST00000600427 520 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AL691403.2-201ENST00000618460 490 ntBASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NF2-208ENST00000403435 2568 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CTRB2-201ENST00000303037 901 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 PMS2P2-201ENST00000425039 1128 ntBASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NDUFS7-216ENST00000546283 1060 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 FHL2-212ENST00000607522 759 ntTSL 2 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
CHD5Q8TDI0 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
CHD5Q8TDI0 ZNF48-205ENST00000613509 3339 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 METTL21AP1-201ENST00000438852 635 ntBASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AL592309.1-201ENST00000443127 649 ntBASIC16.83■□□□□ 0.28
CHD5Q8TDI0 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AC109322.1-201ENST00000524499 1264 ntBASIC16.83■□□□□ 0.28
CHD5Q8TDI0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
CHD5Q8TDI0 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 FAM172A-207ENST00000509739 1031 ntTSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 METTL23-205ENST00000588302 925 ntTSL 5 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHD5Q8TDI0 AL139400.1-201ENST00000366220 510 ntBASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms