Protein–RNA interactions for Protein: Q8NDM7

CFAP43, Cilia- and flagella-associated protein 43, humanhuman

Predictions only

Length 1,665 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP43Q8NDM7 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC25.86■■□□□ 1.73
CFAP43Q8NDM7 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC25.86■■□□□ 1.73
CFAP43Q8NDM7 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC25.86■■□□□ 1.73
CFAP43Q8NDM7 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 EEF1B2-201ENST00000236957 844 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
CFAP43Q8NDM7 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 AC055876.2-201ENST00000531834 546 ntBASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 QPRT-203ENST00000562473 579 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 AL133215.2-201ENST00000609242 977 ntBASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 RBM4-204ENST00000408993 1763 ntAPPRIS P1 TSL 5 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
CFAP43Q8NDM7 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 MRPL28-202ENST00000389675 865 ntAPPRIS P1 TSL 3 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 RN7SL752P-201ENST00000463779 287 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 PACS1-203ENST00000524815 628 ntTSL 4 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 LITAF-210ENST00000571976 548 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 LITAF-214ENST00000574703 486 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 KRT8P39-201ENST00000396270 1433 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 AL133338.1-201ENST00000565695 1517 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 AMT-206ENST00000458307 1860 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 PSMB9-207ENST00000374859 782 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 PSMB9-208ENST00000395330 792 ntTSL 3 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 AC004945.1-201ENST00000416738 983 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 MIR4259-201ENST00000584466 101 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 CHCHD2P3-201ENST00000603038 451 ntBASIC25.83■■□□□ 1.73
CFAP43Q8NDM7 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC25.83■■□□□ 1.72
CFAP43Q8NDM7 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.72
CFAP43Q8NDM7 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC25.83■■□□□ 1.72
CFAP43Q8NDM7 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 AC105940.2-201ENST00000421055 380 ntTSL 3 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 AC011495.1-201ENST00000498085 584 ntBASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 AC022167.4-201ENST00000570290 498 ntTSL 3 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 PC-204ENST00000524491 1714 ntTSL 2 BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
CFAP43Q8NDM7 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 AL031731.1-201ENST00000642131 2094 ntBASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
CFAP43Q8NDM7 ACOT7-204ENST00000377855 1614 ntAPPRIS P4 TSL 1 (best) BASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms