Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 RPL28-209ENST00000560055 670 ntTSL 3 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 MIR4515-201ENST00000584082 81 ntBASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 C20orf181-201ENST00000623918 480 ntBASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 FAM109A-204ENST00000548163 2317 ntAPPRIS P3 TSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AC106886.4-201ENST00000623557 2502 ntBASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
PCDH20Q8N6Y1 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 HSF2-202ENST00000452194 2643 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 COA5-202ENST00000409997 557 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 HCG4-201ENST00000418983 998 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AC112482.1-201ENST00000492080 688 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AL031432.2-201ENST00000566714 459 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AL928711.1-201ENST00000570165 459 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AC068137.2-201ENST00000605408 478 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TUBB8P12-201ENST00000308911 1335 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TUBB7P-202ENST00000428444 1305 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 TUBB8P7-204ENST00000567960 1332 ntBASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.15■□□□□ 0.34
PCDH20Q8N6Y1 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 PODNL1-201ENST00000254320 1859 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 MKNK2P1-201ENST00000437526 628 ntBASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 AC139530.3-201ENST00000620344 690 ntBASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 HARS-203ENST00000431330 1774 ntTSL 2 BASIC17.14■□□□□ 0.33
PCDH20Q8N6Y1 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC17.14■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.3 ms