Protein–RNA interactions for Protein: Q8N4T4

ARHGEF39, Rho guanine nucleotide exchange factor 39, humanhuman

Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39Q8N4T4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 CTSB-202ENST00000353047 3875 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 LPAR5-202ENST00000431922 2695 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
ARHGEF39Q8N4T4 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 AC016027.1-202ENST00000607927 1699 ntBASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM225B-202ENST00000431679 1314 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 AP000344.2-201ENST00000512987 629 ntBASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 LINC01225-203ENST00000563550 1244 ntBASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 METTL23-203ENST00000586738 1059 ntTSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 METTL23-205ENST00000588302 925 ntTSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 AC106886.4-201ENST00000623557 2502 ntBASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 RAD1-202ENST00000341754 2341 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 LRRC14-205ENST00000529022 2243 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC15.79■□□□□ 0.12
ARHGEF39Q8N4T4 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 TCP11L2-201ENST00000299045 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 GGT4P-201ENST00000623672 1708 ntBASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 AC004461.1-201ENST00000412461 403 ntBASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 NLRP6-203ENST00000534750 2936 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 SLCO5A1-206ENST00000530307 2630 ntTSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
ARHGEF39Q8N4T4 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AGGF1P2-201ENST00000426656 2106 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 AL031731.1-201ENST00000642131 2094 ntBASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
ARHGEF39Q8N4T4 RN7SL589P-201ENST00000481268 310 ntBASIC15.77■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms