Protein–RNA interactions for Protein: Q8IWF9

CCDC83, Coiled-coil domain-containing protein 83, humanhuman

Predictions only

Length 413 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC83Q8IWF9 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC83Q8IWF9 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 TMEM177-201ENST00000272521 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 SLC25A6P2-201ENST00000497974 877 ntBASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 REXO1L3P-201ENST00000622202 1288 ntBASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 VEPH1-218ENST00000494677 1714 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 GUCA1A-203ENST00000394237 2233 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 SNX31-201ENST00000311812 2457 ntAPPRIS P1 TSL 2 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC83Q8IWF9 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 FUK-207ENST00000571514 3054 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 TAP2-202ENST00000374899 2497 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 SCARNA2-201ENST00000458748 420 ntBASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC83Q8IWF9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 RAB17-203ENST00000409576 466 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 MPDU1-223ENST00000582151 728 ntBASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 CLEC4GP1-201ENST00000596555 870 ntBASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 IFNL4P1-201ENST00000607083 540 ntBASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 AL139011.1-202ENST00000642063 584 ntBASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC19.73■□□□□ 0.75
CCDC83Q8IWF9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC83Q8IWF9 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28 ms