Protein–RNA interactions for Protein: Q86XT4

TRIM50, E3 ubiquitin-protein ligase TRIM50, humanhuman

Predictions only

Length 487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM50Q86XT4 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
TRIM50Q86XT4 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 NME1-NME2-202ENST00000393193 1021 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CNN2P2-201ENST00000443536 909 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CNN2P3-201ENST00000450201 906 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AC026150.2-201ENST00000564693 1156 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 MIR3197-201ENST00000582241 73 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AC027307.2-201ENST00000591252 911 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 GRIFIN-202ENST00000614228 461 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AL136317.3-201ENST00000618497 906 ntBASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 WHAMMP3-203ENST00000621139 4494 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
TRIM50Q86XT4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 PARP6-220ENST00000569795 2855 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 NDUFAF3-203ENST00000395458 808 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AC124947.2-201ENST00000547118 1133 ntBASIC18.66■□□□□ 0.58
TRIM50Q86XT4 KRT8P23-201ENST00000560090 1207 ntBASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AC051619.7-201ENST00000568314 623 ntBASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AP000842.3-202ENST00000569238 1080 ntBASIC18.66■□□□□ 0.58
TRIM50Q86XT4 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 AC008677.1-201ENST00000519230 1561 ntBASIC18.66■□□□□ 0.58
TRIM50Q86XT4 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRIM50Q86XT4 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 PTMS-202ENST00000389462 773 ntTSL 2 BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TRIM50Q86XT4 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms