Protein–RNA interactions for Protein: Q7Z7G8

VPS13B, Vacuolar protein sorting-associated protein 13B, humanhuman

Predictions only

Length 4,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13BQ7Z7G8 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 PRPSAP2-216ENST00000536323 1872 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 TPI1-206ENST00000488464 791 ntTSL 5 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 MIR4492-201ENST00000581627 80 ntBASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 ASCC2-223ENST00000542393 2594 ntTSL 2 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 ABCF3-203ENST00000429586 2624 ntAPPRIS P2 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 BSG-202ENST00000346916 1605 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC10.21□□□□□ -0.78
VPS13BQ7Z7G8 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC116353.5-201ENST00000638148 1699 ntBASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 GGT4P-201ENST00000623672 1708 ntBASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC092933.1-201ENST00000393644 945 ntBASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 HMBS-216ENST00000543090 1347 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC099336.1-201ENST00000417053 1171 ntBASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 MPDU1-223ENST00000582151 728 ntBASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 NAT9-224ENST00000583757 583 ntTSL 3 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 PRRT3-202ENST00000411976 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 STRN4-204ENST00000539396 2608 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SNX1-214ENST00000625244 324 ntTSL 5 BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC10.2□□□□□ -0.78
VPS13BQ7Z7G8 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 ZDHHC12-201ENST00000372663 1129 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 MIR1908-201ENST00000410394 80 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 SYNPR-202ENST00000450542 1004 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AC068587.10-201ENST00000641210 219 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 EML3-217ENST00000531557 2509 ntTSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 SLC9A3P2-201ENST00000447821 2021 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 AL645728.1-201ENST00000366221 2101 ntBASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 MPL-202ENST00000413998 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC10.19□□□□□ -0.78
VPS13BQ7Z7G8 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC10.19□□□□□ -0.78
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms