Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AC131009.4-201ENST00000624048 1740 ntBASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 FABP5-202ENST00000396359 986 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 RHOQP3-201ENST00000437982 621 ntBASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 PCDHB19P-201ENST00000570871 2371 ntBASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 FAM131A-207ENST00000450976 1335 ntTSL 3 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 AL391256.1-201ENST00000443260 1855 ntBASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 FANCA-203ENST00000389302 1641 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
LYSMD3Q7Z3D4 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 EFCAB1-209ENST00000523092 648 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AP002490.2-201ENST00000524791 560 ntBASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 MIR4492-201ENST00000581627 80 ntBASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 LINC00895-201ENST00000629028 1637 ntBASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.87■□□□□ 0.29
LYSMD3Q7Z3D4 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 GPAT3-208ENST00000611707 2633 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 KLHDC3-202ENST00000326974 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 AC006277.1-201ENST00000624348 1610 ntBASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 RPP21-221ENST00000428040 594 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 AC004877.2-201ENST00000623941 599 ntBASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 SLC41A3-203ENST00000360370 2169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 BCAR1-209ENST00000546196 1340 ntBASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 HARS-203ENST00000431330 1774 ntTSL 2 BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
LYSMD3Q7Z3D4 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 45.6 ms