Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 KRT18P13-201ENST00000400056 1290 ntBASIC16.1■□□□□ 0.17
RNF44Q7L0R7 HMGA1P7-201ENST00000406908 502 ntBASIC16.1■□□□□ 0.17
RNF44Q7L0R7 GPX1P2-201ENST00000429271 606 ntBASIC16.1■□□□□ 0.17
RNF44Q7L0R7 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 CPSF1-207ENST00000531727 704 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 ARHGDIA-208ENST00000581876 709 ntTSL 3 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 REM2-202ENST00000536884 1331 ntTSL 2 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 AC012313.1-201ENST00000593393 3059 ntBASIC16.1■□□□□ 0.17
RNF44Q7L0R7 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RNF44Q7L0R7 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AP002490.2-201ENST00000524791 560 ntBASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 THTPA-204ENST00000554970 569 ntTSL 4 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 THTPA-206ENST00000556015 535 ntTSL 3 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AC013467.2-201ENST00000605472 835 ntBASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AP001350.2-201ENST00000625104 1094 ntBASIC16.09■□□□□ 0.17
RNF44Q7L0R7 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 THEM4-201ENST00000368814 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RNF44Q7L0R7 AP004609.1-201ENST00000498872 1646 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 PITPNC1-203ENST00000580974 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 PTHLH-202ENST00000395868 1674 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 PCDHB17P-201ENST00000539533 2393 ntBASIC16.08■□□□□ 0.17
RNF44Q7L0R7 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
RNF44Q7L0R7 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 FAM19A5-204ENST00000406880 833 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC010327.4-202ENST00000591484 748 ntBASIC16.08■□□□□ 0.16
RNF44Q7L0R7 CYP2A7P1-201ENST00000595391 815 ntBASIC16.08■□□□□ 0.16
RNF44Q7L0R7 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.08■□□□□ 0.16
RNF44Q7L0R7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 VSIG10L2-202ENST00000638636 2304 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 ZNF302-202ENST00000446502 2635 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 AC006277.1-201ENST00000624348 1610 ntBASIC16.08■□□□□ 0.16
RNF44Q7L0R7 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 ATXN7-213ENST00000538065 6842 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
RNF44Q7L0R7 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 QSOX1-201ENST00000367600 2519 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 RPSAP43-201ENST00000402237 625 ntBASIC16.07■□□□□ 0.16
RNF44Q7L0R7 SCRN1-203ENST00000409570 535 ntTSL 4 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 UPF3AP3-201ENST00000420996 769 ntBASIC16.07■□□□□ 0.16
RNF44Q7L0R7 AC140658.5-201ENST00000438532 169 ntBASIC16.07■□□□□ 0.16
RNF44Q7L0R7 FIS1-203ENST00000442303 631 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 ALG1L5P-201ENST00000482043 771 ntBASIC16.07■□□□□ 0.16
RNF44Q7L0R7 MRPL20-203ENST00000482352 1049 ntTSL 2 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.07■□□□□ 0.16
RNF44Q7L0R7 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.07■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms