Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 SDR39U1-206ENST00000553930 1325 ntTSL 5 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 AC008894.3-201ENST00000624324 3103 ntBASIC15.33■□□□□ 0.04
NIPAL3Q6P499 NSFL1C-201ENST00000216879 3568 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 PCDHA1-201ENST00000378133 2726 ntBASIC15.33■□□□□ 0.04
NIPAL3Q6P499 RAB33B-201ENST00000305626 4562 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
NIPAL3Q6P499 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 MICALL2-201ENST00000297508 3121 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AF186996.4-201ENST00000467186 377 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC034243.1-201ENST00000520838 587 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC139887.3-201ENST00000568585 713 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 PAM16-208ENST00000573553 722 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 PNMT-203ENST00000581428 677 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC025062.2-201ENST00000605477 670 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AL589182.2-201ENST00000619332 1049 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 WASF1-207ENST00000392589 3220 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC092364.2-201ENST00000596710 2692 ntBASIC15.32■□□□□ 0.04
NIPAL3Q6P499 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC15.32■□□□□ 0.04
NIPAL3Q6P499 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC15.31■□□□□ 0.04
NIPAL3Q6P499 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ABR-203ENST00000536794 2213 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 SLC12A5-201ENST00000243964 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 MYB-203ENST00000341911 3672 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 RPS2P1-201ENST00000434010 821 ntBASIC15.31■□□□□ 0.04
NIPAL3Q6P499 RNPS1P1-201ENST00000507437 918 ntBASIC15.31■□□□□ 0.04
NIPAL3Q6P499 OR7E14P-202ENST00000530490 1290 ntBASIC15.31■□□□□ 0.04
NIPAL3Q6P499 CBFB-203ENST00000561924 584 ntTSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 PKDREJ-201ENST00000253255 7693 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
NIPAL3Q6P499 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms