Protein–RNA interactions for Protein: Q12824

SMARCB1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, humanhuman

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1Q12824 FAM208A-209ENST00000493960 5600 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.54■□□□□ 0.4
SMARCB1Q12824 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SMARCB1Q12824 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 TUBB3P1-201ENST00000405796 1332 ntBASIC17.53■□□□□ 0.4
SMARCB1Q12824 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 CD1D-201ENST00000368171 2253 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 DPM2-202ENST00000373110 738 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 PP14571-201ENST00000404327 934 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 AL138918.1-201ENST00000568306 659 ntBASIC17.53■□□□□ 0.4
SMARCB1Q12824 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 AC011467.4-201ENST00000594891 528 ntBASIC17.53■□□□□ 0.4
SMARCB1Q12824 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 AC093512.1-201ENST00000617969 520 ntBASIC17.53■□□□□ 0.4
SMARCB1Q12824 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 WLS-202ENST00000354777 2037 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
SMARCB1Q12824 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
SMARCB1Q12824 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 TVP23C-201ENST00000225576 1527 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AL671710.1-201ENST00000610245 2349 ntBASIC17.52■□□□□ 0.4
SMARCB1Q12824 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 KLF2P3-201ENST00000451977 1087 ntBASIC17.52■□□□□ 0.4
SMARCB1Q12824 HLA-J-202ENST00000469281 1241 ntBASIC17.52■□□□□ 0.4
SMARCB1Q12824 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AC020765.3-201ENST00000613051 740 ntBASIC17.52■□□□□ 0.4
SMARCB1Q12824 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC17.52■□□□□ 0.4
SMARCB1Q12824 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
SMARCB1Q12824 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCB1Q12824 AC139713.2-201ENST00000641328 2723 ntBASIC17.52■□□□□ 0.39
SMARCB1Q12824 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.52■□□□□ 0.39
SMARCB1Q12824 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCB1Q12824 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.39
SMARCB1Q12824 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCB1Q12824 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
SMARCB1Q12824 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.52■□□□□ 0.39
SMARCB1Q12824 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCB1Q12824 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCB1Q12824 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCB1Q12824 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 PCDHB18P-201ENST00000524813 2368 ntBASIC17.51■□□□□ 0.39
SMARCB1Q12824 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCB1Q12824 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 VMA21-202ENST00000370361 693 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SMARCB1Q12824 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC17.51■□□□□ 0.39
SMARCB1Q12824 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC17.51■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms