Protein–RNA interactions for Protein: P78396

CCNA1, Cyclin-A1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCNA1P78396 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 PSMC3-201ENST00000298852 1544 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCNA1P78396 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA1P78396 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNA1P78396 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 RPL37AP1-201ENST00000412502 279 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC18.96■□□□□ 0.63
CCNA1P78396 AL353779.1-201ENST00000434793 351 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 TMPRSS11CP-201ENST00000453277 683 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 NECAP2-203ENST00000457722 935 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC18.96■□□□□ 0.63
CCNA1P78396 AC009407.1-201ENST00000568958 598 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 AC105021.1-202ENST00000570572 669 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 ZNF226-211ENST00000588742 447 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 AC013467.2-201ENST00000605472 835 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 AC008738.7-201ENST00000609744 511 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 ZNF655-225ENST00000626122 705 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA1P78396 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC18.96■□□□□ 0.63
CCNA1P78396 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
CCNA1P78396 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC18.96■□□□□ 0.63
CCNA1P78396 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.96■□□□□ 0.63
CCNA1P78396 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CCNA1P78396 AC008764.6-201ENST00000595909 2069 ntBASIC18.96■□□□□ 0.63
CCNA1P78396 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC18.96■□□□□ 0.63
CCNA1P78396 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
CCNA1P78396 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 LINC02012-201ENST00000608206 1725 ntBASIC18.95■□□□□ 0.62
CCNA1P78396 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 HLA-J-202ENST00000469281 1241 ntBASIC18.95■□□□□ 0.62
CCNA1P78396 TP53TG3HP-202ENST00000569755 579 ntBASIC18.95■□□□□ 0.62
CCNA1P78396 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 AL844908.2-201ENST00000609461 460 ntBASIC18.95■□□□□ 0.62
CCNA1P78396 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
CCNA1P78396 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CCNA1P78396 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
CCNA1P78396 FAHD2B-202ENST00000414820 1388 ntAPPRIS P1 TSL 5 BASIC18.94■□□□□ 0.62
CCNA1P78396 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC18.94■□□□□ 0.62
CCNA1P78396 PHGDH-208ENST00000641023 2096 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCNA1P78396 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 AC006277.1-201ENST00000624348 1610 ntBASIC18.94■□□□□ 0.62
CCNA1P78396 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 CSHL1-204ENST00000392824 823 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 STMN1-204ENST00000426559 948 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC18.94■□□□□ 0.62
CCNA1P78396 AL132655.2-201ENST00000596276 594 ntBASIC18.94■□□□□ 0.62
CCNA1P78396 Metazoa_SRP.112-201ENST00000613101 279 ntBASIC18.94■□□□□ 0.62
CCNA1P78396 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC18.94■□□□□ 0.62
CCNA1P78396 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 AC007541.1-201ENST00000570282 1469 ntBASIC18.94■□□□□ 0.62
CCNA1P78396 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.94■□□□□ 0.62
CCNA1P78396 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 TEAD3-204ENST00000639578 1308 ntAPPRIS P2 TSL 1 (best) BASIC18.94■□□□□ 0.62
CCNA1P78396 DNAJA3-203ENST00000431375 2294 ntTSL 2 BASIC18.94■□□□□ 0.62
CCNA1P78396 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.94■□□□□ 0.62
CCNA1P78396 PITPNM2-AS1-201ENST00000506255 2191 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 GNE-204ENST00000539208 2190 ntTSL 2 BASIC18.93■□□□□ 0.62
CCNA1P78396 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CCNA1P78396 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.93■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms