Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 SMIM13-202ENST00000416247 4688 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC16■□□□□ 0.15
NR1H2P55055 PPM1J-202ENST00000464951 2474 ntTSL 1 (best) BASIC16■□□□□ 0.15
NR1H2P55055 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC16■□□□□ 0.15
NR1H2P55055 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H2P55055 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC15.99■□□□□ 0.15
NR1H2P55055 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC15.99■□□□□ 0.15
NR1H2P55055 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H2P55055 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 NUS1P1-201ENST00000446295 882 ntBASIC15.99■□□□□ 0.15
NR1H2P55055 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC15.99■□□□□ 0.15
NR1H2P55055 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.99■□□□□ 0.15
NR1H2P55055 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC15.99■□□□□ 0.15
NR1H2P55055 AC022532.1-201ENST00000624563 1728 ntBASIC15.99■□□□□ 0.15
NR1H2P55055 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 ZNF418-208ENST00000599852 2501 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC15.99■□□□□ 0.15
NR1H2P55055 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.98■□□□□ 0.15
NR1H2P55055 KIF3A-202ENST00000378746 6325 ntAPPRIS P3 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 PFN1-201ENST00000225655 1291 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC15.98■□□□□ 0.15
NR1H2P55055 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
NR1H2P55055 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 DRAXINP1-201ENST00000437611 948 ntBASIC15.98■□□□□ 0.15
NR1H2P55055 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 AP002383.4-201ENST00000442518 975 ntBASIC15.98■□□□□ 0.15
NR1H2P55055 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC15.98■□□□□ 0.15
NR1H2P55055 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC15.98■□□□□ 0.15
NR1H2P55055 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 MIR3180-1-201ENST00000580374 94 ntBASIC15.98■□□□□ 0.15
NR1H2P55055 MIR3180-3-201ENST00000584616 94 ntBASIC15.98■□□□□ 0.15
NR1H2P55055 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC15.98■□□□□ 0.15
NR1H2P55055 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 SNX9-201ENST00000392185 4198 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
NR1H2P55055 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
NR1H2P55055 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms