Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 AC005622.1-202ENST00000637093 1543 ntTSL 5 BASIC18.33■□□□□ 0.52
ACLYP53396 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
ACLYP53396 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
ACLYP53396 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC18.33■□□□□ 0.52
ACLYP53396 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
ACLYP53396 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 AL023806.1-201ENST00000603994 1649 ntBASIC18.32■□□□□ 0.52
ACLYP53396 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 LRCH4-201ENST00000310300 2552 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 MIR1909-201ENST00000411312 80 ntBASIC18.32■□□□□ 0.52
ACLYP53396 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC18.32■□□□□ 0.52
ACLYP53396 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC18.32■□□□□ 0.52
ACLYP53396 RPS2P32-201ENST00000439199 892 ntBASIC18.32■□□□□ 0.52
ACLYP53396 AC044860.1-202ENST00000559481 777 ntBASIC18.32■□□□□ 0.52
ACLYP53396 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 AC008770.3-202ENST00000591944 567 ntTSL 4 BASIC18.32■□□□□ 0.52
ACLYP53396 AL138688.1-201ENST00000624851 1594 ntBASIC18.32■□□□□ 0.52
ACLYP53396 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC18.32■□□□□ 0.52
ACLYP53396 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
ACLYP53396 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.32■□□□□ 0.52
ACLYP53396 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
ACLYP53396 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.32■□□□□ 0.52
ACLYP53396 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.31■□□□□ 0.52
ACLYP53396 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC18.31■□□□□ 0.52
ACLYP53396 TUBB8P12-201ENST00000308911 1335 ntBASIC18.31■□□□□ 0.52
ACLYP53396 TUBB7P-202ENST00000428444 1305 ntBASIC18.31■□□□□ 0.52
ACLYP53396 TUBB8P7-204ENST00000567960 1332 ntBASIC18.31■□□□□ 0.52
ACLYP53396 AC112492.5-201ENST00000421897 457 ntBASIC18.31■□□□□ 0.52
ACLYP53396 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ACLYP53396 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC18.31■□□□□ 0.52
ACLYP53396 SPDYE18-201ENST00000510091 1050 ntBASIC18.31■□□□□ 0.52
ACLYP53396 AC009902.2-201ENST00000518880 620 ntTSL 4 BASIC18.31■□□□□ 0.52
ACLYP53396 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.31■□□□□ 0.52
ACLYP53396 RAB35-202ENST00000534951 939 ntTSL 2 BASIC18.31■□□□□ 0.52
ACLYP53396 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC18.31■□□□□ 0.52
ACLYP53396 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC18.31■□□□□ 0.52
ACLYP53396 RPS15-212ENST00000593052 629 ntTSL 2 BASIC18.31■□□□□ 0.52
ACLYP53396 AC013467.2-201ENST00000605472 835 ntBASIC18.31■□□□□ 0.52
ACLYP53396 TEX48-202ENST00000612244 662 ntTSL 3 BASIC18.31■□□□□ 0.52
ACLYP53396 PHOSPHO2-207ENST00000616524 1253 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
ACLYP53396 AC007431.3-201ENST00000623221 587 ntBASIC18.31■□□□□ 0.52
ACLYP53396 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 RNF7-201ENST00000273480 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
ACLYP53396 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
ACLYP53396 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
ACLYP53396 AC006277.1-201ENST00000624348 1610 ntBASIC18.31■□□□□ 0.52
ACLYP53396 SLC7A15P-201ENST00000424028 1363 ntBASIC18.3■□□□□ 0.52
ACLYP53396 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.3■□□□□ 0.52
ACLYP53396 DPM2-202ENST00000373110 738 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC18.3■□□□□ 0.52
ACLYP53396 AC114501.2-201ENST00000439631 535 ntBASIC18.3■□□□□ 0.52
ACLYP53396 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC18.3■□□□□ 0.52
ACLYP53396 KRT17P8-201ENST00000540749 863 ntBASIC18.3■□□□□ 0.52
ACLYP53396 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC18.3■□□□□ 0.52
ACLYP53396 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC18.3■□□□□ 0.52
ACLYP53396 AC106886.1-201ENST00000568660 600 ntBASIC18.3■□□□□ 0.52
ACLYP53396 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC18.3■□□□□ 0.52
ACLYP53396 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 MIR6805-201ENST00000615055 62 ntBASIC18.3■□□□□ 0.52
ACLYP53396 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC18.3■□□□□ 0.52
ACLYP53396 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
ACLYP53396 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
ACLYP53396 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.3■□□□□ 0.52
ACLYP53396 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 65.6 ms