Protein–RNA interactions for Protein: P52657

GTF2A2, Transcription initiation factor IIA subunit 2, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A2P52657 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF2A2P52657 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 MEP1AP4-201ENST00000423244 1087 ntBASIC19.16■□□□□ 0.66
GTF2A2P52657 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF2A2P52657 AC099552.3-201ENST00000454149 367 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF2A2P52657 HOXB3-204ENST00000465120 943 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF2A2P52657 KRBOX4-207ENST00000487081 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 SPDYE18-201ENST00000510091 1050 ntBASIC19.16■□□□□ 0.66
GTF2A2P52657 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC19.16■□□□□ 0.66
GTF2A2P52657 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A2P52657 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC19.16■□□□□ 0.66
GTF2A2P52657 FHL2-212ENST00000607522 759 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A2P52657 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC19.16■□□□□ 0.66
GTF2A2P52657 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC19.16■□□□□ 0.66
GTF2A2P52657 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
GTF2A2P52657 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 SHOX-201ENST00000334060 1951 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2A2P52657 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 PIR-201ENST00000380420 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 TTTY23B-201ENST00000442790 549 ntBASIC19.15■□□□□ 0.66
GTF2A2P52657 RN7SL837P-201ENST00000463010 287 ntBASIC19.15■□□□□ 0.66
GTF2A2P52657 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 DCTD-213ENST00000510370 794 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2A2P52657 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC19.15■□□□□ 0.66
GTF2A2P52657 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC19.15■□□□□ 0.66
GTF2A2P52657 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC19.15■□□□□ 0.66
GTF2A2P52657 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2A2P52657 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.15■□□□□ 0.66
GTF2A2P52657 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.15■□□□□ 0.66
GTF2A2P52657 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC19.15■□□□□ 0.66
GTF2A2P52657 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 NFIC-201ENST00000341919 1573 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
GTF2A2P52657 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.14■□□□□ 0.66
GTF2A2P52657 CLN3-201ENST00000333496 1608 ntTSL 5 BASIC19.14■□□□□ 0.66
GTF2A2P52657 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A2P52657 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A2P52657 AC116353.5-201ENST00000638148 1699 ntBASIC19.14■□□□□ 0.66
GTF2A2P52657 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
GTF2A2P52657 IRF3-217ENST00000597198 1741 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.66
GTF2A2P52657 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 HCG11-201ENST00000411553 5696 ntBASIC19.14■□□□□ 0.65
GTF2A2P52657 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF2A2P52657 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC19.14■□□□□ 0.65
GTF2A2P52657 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 NEU3-203ENST00000529024 581 ntTSL 3 BASIC19.14■□□□□ 0.65
GTF2A2P52657 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 RPS15-212ENST00000593052 629 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 SRD5A3P1-201ENST00000603021 949 ntBASIC19.14■□□□□ 0.65
GTF2A2P52657 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 CHMP5-201ENST00000223500 1477 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC19.14■□□□□ 0.65
GTF2A2P52657 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
GTF2A2P52657 WNK2-202ENST00000395477 6834 ntAPPRIS ALT2 TSL 5 BASIC19.14■□□□□ 0.65
GTF2A2P52657 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC19.13■□□□□ 0.65
GTF2A2P52657 GGT5-201ENST00000263112 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
GTF2A2P52657 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
GTF2A2P52657 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 53.6 ms