Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PRIM2P49643 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 NKIRAS1-206ENST00000425478 2014 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC16.04■□□□□ 0.16
PRIM2P49643 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.04■□□□□ 0.16
PRIM2P49643 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PRIM2P49643 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 MICALL1-201ENST00000215957 4710 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.03■□□□□ 0.16
PRIM2P49643 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 TSPY19P-201ENST00000418461 509 ntBASIC16.03■□□□□ 0.16
PRIM2P49643 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 TSPY18P-201ENST00000441642 509 ntBASIC16.03■□□□□ 0.16
PRIM2P49643 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC16.03■□□□□ 0.16
PRIM2P49643 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.03■□□□□ 0.16
PRIM2P49643 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 AC125616.1-201ENST00000540369 1015 ntTSL 3 BASIC16.03■□□□□ 0.16
PRIM2P49643 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 AC012313.10-201ENST00000623509 926 ntBASIC16.03■□□□□ 0.16
PRIM2P49643 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC16.03■□□□□ 0.16
PRIM2P49643 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PRIM2P49643 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PRIM2P49643 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC16.02■□□□□ 0.16
PRIM2P49643 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
PRIM2P49643 TMEM37-201ENST00000306406 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 BSG-203ENST00000353555 1616 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
PRIM2P49643 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 LINC00982-205ENST00000420957 435 ntBASIC16.02■□□□□ 0.16
PRIM2P49643 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC16.02■□□□□ 0.16
PRIM2P49643 HOXB-AS2-201ENST00000464382 845 ntTSL 4 BASIC16.02■□□□□ 0.16
PRIM2P49643 KRT18P56-201ENST00000507275 550 ntBASIC16.02■□□□□ 0.16
PRIM2P49643 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.02■□□□□ 0.16
PRIM2P49643 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC16.02■□□□□ 0.16
PRIM2P49643 CYB561-217ENST00000582997 877 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 CLEC4GP1-201ENST00000596555 870 ntBASIC16.02■□□□□ 0.16
PRIM2P49643 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC16.02■□□□□ 0.16
PRIM2P49643 AL022326.1-202ENST00000641533 845 ntBASIC16.02■□□□□ 0.16
PRIM2P49643 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PRIM2P49643 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC16.02■□□□□ 0.15
PRIM2P49643 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PRIM2P49643 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC16.02■□□□□ 0.15
PRIM2P49643 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.02■□□□□ 0.15
PRIM2P49643 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.15
PRIM2P49643 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 NACAD-202ENST00000490531 4780 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.15
PRIM2P49643 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
PRIM2P49643 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC16.01■□□□□ 0.15
PRIM2P49643 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.01■□□□□ 0.15
PRIM2P49643 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC16.01■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 40.1 ms