Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
TM4SF4P48230 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF4P48230 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 CD300LG-206ENST00000588884 1459 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
TM4SF4P48230 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC18.85■□□□□ 0.61
TM4SF4P48230 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
TM4SF4P48230 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.85■□□□□ 0.61
TM4SF4P48230 KCNQ1-AS1-201ENST00000440887 1084 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 AC007551.1-201ENST00000457394 519 ntBASIC18.85■□□□□ 0.61
TM4SF4P48230 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 RHOQP1-201ENST00000555758 579 ntBASIC18.85■□□□□ 0.61
TM4SF4P48230 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC18.85■□□□□ 0.61
TM4SF4P48230 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC18.85■□□□□ 0.61
TM4SF4P48230 MIR5189-201ENST00000577370 114 ntBASIC18.85■□□□□ 0.61
TM4SF4P48230 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 AL138781.2-201ENST00000617896 1843 ntBASIC18.85■□□□□ 0.61
TM4SF4P48230 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
TM4SF4P48230 DMAC2-201ENST00000221943 1692 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
TM4SF4P48230 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 AC006277.1-201ENST00000624348 1610 ntBASIC18.85■□□□□ 0.61
TM4SF4P48230 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
TM4SF4P48230 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.85■□□□□ 0.61
TM4SF4P48230 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 KRT8P39-201ENST00000396270 1433 ntBASIC18.84■□□□□ 0.61
TM4SF4P48230 PSMC3-212ENST00000602866 1373 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TM4SF4P48230 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC18.84■□□□□ 0.61
TM4SF4P48230 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 FAM49B-224ENST00000522941 1700 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF4P48230 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC18.84■□□□□ 0.61
TM4SF4P48230 AL161638.1-201ENST00000420354 481 ntTSL 3 BASIC18.84■□□□□ 0.61
TM4SF4P48230 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 AL162726.2-201ENST00000438986 1017 ntBASIC18.84■□□□□ 0.61
TM4SF4P48230 AL139010.1-201ENST00000454878 894 ntBASIC18.84■□□□□ 0.61
TM4SF4P48230 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC18.84■□□□□ 0.61
TM4SF4P48230 ZNF767P-206ENST00000513792 565 ntBASIC18.84■□□□□ 0.61
TM4SF4P48230 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF4P48230 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC18.84■□□□□ 0.61
TM4SF4P48230 RN7SL190P-201ENST00000582519 257 ntBASIC18.84■□□□□ 0.61
TM4SF4P48230 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 APBB2-204ENST00000502841 1681 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC18.84■□□□□ 0.61
TM4SF4P48230 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
TM4SF4P48230 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TM4SF4P48230 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC18.84■□□□□ 0.61
TM4SF4P48230 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM4SF4P48230 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TM4SF4P48230 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM4SF4P48230 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TM4SF4P48230 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TM4SF4P48230 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC18.83■□□□□ 0.6
TM4SF4P48230 MARK2-207ENST00000502399 2885 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TM4SF4P48230 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC18.83■□□□□ 0.6
TM4SF4P48230 AL442647.2-201ENST00000429864 857 ntBASIC18.83■□□□□ 0.6
TM4SF4P48230 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.6
TM4SF4P48230 HNRNPA1P13-201ENST00000510646 963 ntBASIC18.83■□□□□ 0.6
TM4SF4P48230 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC18.83■□□□□ 0.6
TM4SF4P48230 AP000812.2-201ENST00000538934 718 ntBASIC18.83■□□□□ 0.6
TM4SF4P48230 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC18.83■□□□□ 0.6
TM4SF4P48230 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.83■□□□□ 0.6
TM4SF4P48230 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC18.83■□□□□ 0.6
TM4SF4P48230 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC18.83■□□□□ 0.6
TM4SF4P48230 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
TM4SF4P48230 ZBTB16-201ENST00000335953 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TM4SF4P48230 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC18.82■□□□□ 0.6
TM4SF4P48230 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 SPAG7-201ENST00000206020 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TM4SF4P48230 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 AC005229.1-201ENST00000392885 409 ntBASIC18.82■□□□□ 0.6
TM4SF4P48230 FO393414.2-201ENST00000405153 598 ntBASIC18.82■□□□□ 0.6
TM4SF4P48230 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC18.82■□□□□ 0.6
TM4SF4P48230 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms