Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 MKNK2P1-201ENST00000437526 628 ntBASIC16.94■□□□□ 0.3
XPAP23025 ALG1L5P-201ENST00000482043 771 ntBASIC16.94■□□□□ 0.3
XPAP23025 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC16.94■□□□□ 0.3
XPAP23025 AC211476.1-201ENST00000503899 468 ntBASIC16.94■□□□□ 0.3
XPAP23025 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.94■□□□□ 0.3
XPAP23025 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC16.94■□□□□ 0.3
XPAP23025 WT1-AS_2.1-201ENST00000613208 137 ntBASIC16.94■□□□□ 0.3
XPAP23025 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC16.94■□□□□ 0.3
XPAP23025 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
XPAP23025 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
XPAP23025 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
XPAP23025 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
XPAP23025 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
XPAP23025 MIER1-204ENST00000371012 2420 ntTSL 2 BASIC16.94■□□□□ 0.3
XPAP23025 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 AC131009.4-201ENST00000624048 1740 ntBASIC16.93■□□□□ 0.3
XPAP23025 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 ZDHHC9-202ENST00000371064 2473 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
XPAP23025 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC16.93■□□□□ 0.3
XPAP23025 AC092068.3-201ENST00000587894 2016 ntBASIC16.93■□□□□ 0.3
XPAP23025 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 AC002056.1-201ENST00000395613 760 ntBASIC16.93■□□□□ 0.3
XPAP23025 RPS8P6-201ENST00000426177 609 ntBASIC16.93■□□□□ 0.3
XPAP23025 STARD13-205ENST00000439831 945 ntTSL 2 BASIC16.93■□□□□ 0.3
XPAP23025 CEND1P1-201ENST00000451006 455 ntBASIC16.93■□□□□ 0.3
XPAP23025 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC16.93■□□□□ 0.3
XPAP23025 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC16.93■□□□□ 0.3
XPAP23025 RPL28-209ENST00000560055 670 ntTSL 3 BASIC16.93■□□□□ 0.3
XPAP23025 MPDU1-223ENST00000582151 728 ntBASIC16.93■□□□□ 0.3
XPAP23025 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 AC091812.2-201ENST00000619081 385 ntBASIC16.93■□□□□ 0.3
XPAP23025 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 CEP83-AS1-201ENST00000623122 2482 ntBASIC16.93■□□□□ 0.3
XPAP23025 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC16.93■□□□□ 0.3
XPAP23025 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
XPAP23025 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
XPAP23025 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 ODF2-204ENST00000372814 2249 ntTSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.92■□□□□ 0.3
XPAP23025 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.92■□□□□ 0.3
XPAP23025 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC16.92■□□□□ 0.3
XPAP23025 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 HIST4H4-204ENST00000539745 577 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
XPAP23025 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 MIR4469-201ENST00000583919 79 ntBASIC16.92■□□□□ 0.3
XPAP23025 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC16.92■□□□□ 0.3
XPAP23025 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
XPAP23025 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
XPAP23025 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC16.92■□□□□ 0.3
XPAP23025 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
XPAP23025 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms