Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 GMPR2-217ENST00000559104 1719 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC17.63■□□□□ 0.41
MMP8P22894 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC17.63■□□□□ 0.41
MMP8P22894 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
MMP8P22894 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC17.62■□□□□ 0.41
MMP8P22894 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP8P22894 AC079328.2-201ENST00000561241 3354 ntBASIC17.62■□□□□ 0.41
MMP8P22894 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 ADRA1A-202ENST00000354550 1765 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 GPAA1P2-202ENST00000606848 1787 ntBASIC17.62■□□□□ 0.41
MMP8P22894 HMGA1P7-201ENST00000406908 502 ntBASIC17.62■□□□□ 0.41
MMP8P22894 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.62■□□□□ 0.41
MMP8P22894 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.62■□□□□ 0.41
MMP8P22894 MTRF1LP2-201ENST00000506027 1122 ntBASIC17.62■□□□□ 0.41
MMP8P22894 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP8P22894 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC17.62■□□□□ 0.41
MMP8P22894 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.62■□□□□ 0.41
MMP8P22894 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 AL645728.2-201ENST00000641974 660 ntBASIC17.62■□□□□ 0.41
MMP8P22894 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP8P22894 FAM49B-202ENST00000517654 1817 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
MMP8P22894 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC17.62■□□□□ 0.41
MMP8P22894 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
MMP8P22894 AC092364.2-201ENST00000596710 2692 ntBASIC17.62■□□□□ 0.41
MMP8P22894 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
MMP8P22894 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 NRN1L-201ENST00000339176 710 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
MMP8P22894 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 RHOQP3-201ENST00000437982 621 ntBASIC17.61■□□□□ 0.41
MMP8P22894 STARD13-205ENST00000439831 945 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 AL513480.1-201ENST00000451731 511 ntBASIC17.61■□□□□ 0.41
MMP8P22894 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 AC096734.2-201ENST00000562054 433 ntBASIC17.61■□□□□ 0.41
MMP8P22894 AC034105.1-201ENST00000563488 319 ntBASIC17.61■□□□□ 0.41
MMP8P22894 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 AC244517.5-205ENST00000623615 575 ntTSL 4 BASIC17.61■□□□□ 0.41
MMP8P22894 AC010507.1-201ENST00000633895 436 ntBASIC17.61■□□□□ 0.41
MMP8P22894 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 AC104109.2-201ENST00000602919 1418 ntBASIC17.61■□□□□ 0.41
MMP8P22894 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC17.61■□□□□ 0.41
MMP8P22894 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 PDE4DIP-230ENST00000530472 1690 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
MMP8P22894 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC17.61■□□□□ 0.41
MMP8P22894 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC17.6■□□□□ 0.41
MMP8P22894 CYP2T1P-202ENST00000641596 2535 ntBASIC17.6■□□□□ 0.41
MMP8P22894 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MMP8P22894 HINT1-201ENST00000304043 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 SELENOM-210ENST00000611680 689 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
MMP8P22894 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
MMP8P22894 UBAC2-203ENST00000403766 1375 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
MMP8P22894 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms