Protein–RNA interactions for Protein: P19876

CXCL3, C-X-C motif chemokine 3, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3P19876 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
CXCL3P19876 NDRG2-202ENST00000298687 2122 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC14.12□□□□□ -0.15
CXCL3P19876 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 LINC00528-201ENST00000600723 2160 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 AC007191.1-201ENST00000623179 2995 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC14.12□□□□□ -0.15
CXCL3P19876 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 GRAMD4P1-201ENST00000435181 1110 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.12□□□□□ -0.15
CXCL3P19876 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.12□□□□□ -0.15
CXCL3P19876 CD99P1-205ENST00000527459 561 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC14.12□□□□□ -0.15
CXCL3P19876 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC14.12□□□□□ -0.15
CXCL3P19876 FLI1-207ENST00000534087 3859 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 EPN2-201ENST00000314728 4871 ntAPPRIS P4 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 GRK6P1-201ENST00000400595 1711 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 GPR89P-201ENST00000407924 1495 ntBASIC14.12□□□□□ -0.15
CXCL3P19876 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.12□□□□□ -0.15
CXCL3P19876 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 SLC11A2-204ENST00000541174 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
CXCL3P19876 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 LRRN1-201ENST00000319331 3823 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.11□□□□□ -0.15
CXCL3P19876 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 FOXP1-210ENST00000484350 1996 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC29A1-203ENST00000371724 2275 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 ACE-204ENST00000428043 5120 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 FDX2-206ENST00000492239 773 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 RPPH1-201ENST00000516869 333 ntBASIC14.11□□□□□ -0.15
CXCL3P19876 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 RNF121-214ENST00000533380 870 ntTSL 3 BASIC14.11□□□□□ -0.15
CXCL3P19876 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.11□□□□□ -0.15
CXCL3P19876 AF186192.3-201ENST00000583427 947 ntBASIC14.11□□□□□ -0.15
CXCL3P19876 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 NEIL2-201ENST00000284503 2671 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC14.11□□□□□ -0.15
CXCL3P19876 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 PPP1R26P4-201ENST00000619065 3527 ntBASIC14.11□□□□□ -0.15
CXCL3P19876 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
CXCL3P19876 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
CXCL3P19876 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms