Protein–RNA interactions for Protein: P16234

PDGFRA, Platelet-derived growth factor receptor alpha, humanhuman

Predictions only

Length 1,089 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRAP16234 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 GCK-202ENST00000345378 2421 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
PDGFRAP16234 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC17.63■□□□□ 0.41
PDGFRAP16234 BCAT2-209ENST00000599246 1449 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.63■□□□□ 0.41
PDGFRAP16234 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
PDGFRAP16234 YPEL3-203ENST00000562641 1941 ntTSL 3 BASIC17.62■□□□□ 0.41
PDGFRAP16234 AC079328.2-201ENST00000561241 3354 ntBASIC17.62■□□□□ 0.41
PDGFRAP16234 EDC3-202ENST00000426797 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 MOV10L1-201ENST00000262794 3960 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 EVA1C-202ENST00000382699 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
PDGFRAP16234 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC17.62■□□□□ 0.41
PDGFRAP16234 CRCP-205ENST00000431089 942 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 VN2R19P-201ENST00000442399 1052 ntBASIC17.62■□□□□ 0.41
PDGFRAP16234 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 HS6ST1P1-201ENST00000481504 1234 ntBASIC17.62■□□□□ 0.41
PDGFRAP16234 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.62■□□□□ 0.41
PDGFRAP16234 CALM1-205ENST00000553542 877 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 AC005412.3-201ENST00000580309 715 ntBASIC17.62■□□□□ 0.41
PDGFRAP16234 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 AL139011.1-202ENST00000642063 584 ntBASIC17.62■□□□□ 0.41
PDGFRAP16234 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 NPY4R-202ENST00000612632 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 NPY4R2-202ENST00000613306 1800 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC17.62■□□□□ 0.41
PDGFRAP16234 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 STOX1-201ENST00000298596 3377 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 SSPN-201ENST00000242729 2788 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
PDGFRAP16234 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
PDGFRAP16234 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFRAP16234 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 WDR90-209ENST00000547944 1672 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFRAP16234 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC17.61■□□□□ 0.41
PDGFRAP16234 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDGFRAP16234 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 HSPB1-201ENST00000248553 909 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 CRYGEP-201ENST00000412192 528 ntBASIC17.61■□□□□ 0.41
PDGFRAP16234 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFRAP16234 FAM185BP-201ENST00000443595 716 ntBASIC17.61■□□□□ 0.41
PDGFRAP16234 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC17.61■□□□□ 0.41
PDGFRAP16234 ARHGEF25-208ENST00000616622 2103 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFRAP16234 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 ANAPC13-206ENST00000514612 1420 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
PDGFRAP16234 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.61■□□□□ 0.41
PDGFRAP16234 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
PDGFRAP16234 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
PDGFRAP16234 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC17.61■□□□□ 0.41
PDGFRAP16234 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFRAP16234 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFRAP16234 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFRAP16234 AL591424.1-201ENST00000442569 1213 ntBASIC17.6■□□□□ 0.41
PDGFRAP16234 KRT18P3-201ENST00000451602 1288 ntBASIC17.6■□□□□ 0.41
PDGFRAP16234 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC17.6■□□□□ 0.41
PDGFRAP16234 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC103957.2-201ENST00000521218 510 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.6■□□□□ 0.41
PDGFRAP16234 DYNLL1-204ENST00000548214 616 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC064836.3-201ENST00000607928 673 ntBASIC17.6■□□□□ 0.41
PDGFRAP16234 FAM197Y3-203ENST00000618346 717 ntBASIC17.6■□□□□ 0.41
PDGFRAP16234 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFRAP16234 HMGCLL1-202ENST00000308161 1314 ntTSL 2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC17.6■□□□□ 0.41
PDGFRAP16234 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 AC006538.1-201ENST00000567905 1585 ntBASIC17.6■□□□□ 0.41
PDGFRAP16234 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 FBXO4-202ENST00000296812 1731 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
PDGFRAP16234 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.6■□□□□ 0.41
PDGFRAP16234 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms