Protein–RNA interactions for Protein: P13236

CCL4, C-C motif chemokine 4, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL4P13236 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC15.75■□□□□ 0.11
CCL4P13236 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 AC106772.1-201ENST00000506629 591 ntTSL 3 BASIC15.75■□□□□ 0.11
CCL4P13236 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 COQ9-214ENST00000567933 882 ntTSL 3 BASIC15.75■□□□□ 0.11
CCL4P13236 MRPL34-202ENST00000594999 555 ntAPPRIS P2 TSL 2 BASIC15.75■□□□□ 0.11
CCL4P13236 SIGLEC29P-201ENST00000599873 1114 ntBASIC15.75■□□□□ 0.11
CCL4P13236 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC15.75■□□□□ 0.11
CCL4P13236 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC15.75■□□□□ 0.11
CCL4P13236 AC067852.2-201ENST00000590513 2313 ntBASIC15.75■□□□□ 0.11
CCL4P13236 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC15.75■□□□□ 0.11
CCL4P13236 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 FRS3-201ENST00000259748 2094 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.75■□□□□ 0.11
CCL4P13236 AC006277.1-201ENST00000624348 1610 ntBASIC15.75■□□□□ 0.11
CCL4P13236 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.75■□□□□ 0.11
CCL4P13236 AC092068.3-201ENST00000587894 2016 ntBASIC15.75■□□□□ 0.11
CCL4P13236 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
CCL4P13236 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 TUBB8P12-201ENST00000308911 1335 ntBASIC15.74■□□□□ 0.11
CCL4P13236 TUBB7P-202ENST00000428444 1305 ntBASIC15.74■□□□□ 0.11
CCL4P13236 TUBB8P7-204ENST00000567960 1332 ntBASIC15.74■□□□□ 0.11
CCL4P13236 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 LCORL-203ENST00000382226 5009 ntAPPRIS P2 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CCL4P13236 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AL353597.1-201ENST00000414875 998 ntTSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.74■□□□□ 0.11
CCL4P13236 GAPDHP21-201ENST00000450301 1010 ntBASIC15.74■□□□□ 0.11
CCL4P13236 HLA-V-204ENST00000476601 1289 ntBASIC15.74■□□□□ 0.11
CCL4P13236 RBAKDN-201ENST00000498308 514 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC15.74■□□□□ 0.11
CCL4P13236 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.74■□□□□ 0.11
CCL4P13236 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 AC124947.2-201ENST00000547118 1133 ntBASIC15.74■□□□□ 0.11
CCL4P13236 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.74■□□□□ 0.11
CCL4P13236 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 HEXIM2-206ENST00000591576 1176 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.74■□□□□ 0.11
CCL4P13236 AC009118.2-201ENST00000613275 655 ntBASIC15.74■□□□□ 0.11
CCL4P13236 SPTSSB-204ENST00000617024 1292 ntBASIC15.74■□□□□ 0.11
CCL4P13236 GPER1-207ENST00000619052 571 ntTSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CCL4P13236 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CCL4P13236 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 ZFP1-209ENST00000570010 1457 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CCL4P13236 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC15.73■□□□□ 0.11
CCL4P13236 PIN1P1-201ENST00000412108 996 ntBASIC15.73■□□□□ 0.11
CCL4P13236 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC15.73■□□□□ 0.11
CCL4P13236 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.73■□□□□ 0.11
CCL4P13236 MTND6P24-201ENST00000440466 518 ntBASIC15.73■□□□□ 0.11
CCL4P13236 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.73■□□□□ 0.11
CCL4P13236 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
CCL4P13236 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC15.73■□□□□ 0.11
CCL4P13236 AL662799.1-202ENST00000614205 422 ntBASIC15.73■□□□□ 0.11
CCL4P13236 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.73■□□□□ 0.11
CCL4P13236 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC15.73■□□□□ 0.11
CCL4P13236 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CCL4P13236 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 73.8 ms