Protein–RNA interactions for Protein: P0C1H6

H2BFM, Histone H2B type F-M, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2BFMP0C1H6 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
H2BFMP0C1H6 AMT-206ENST00000458307 1860 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 ASAP3-212ENST00000618240 2226 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 ISPD-201ENST00000399310 1709 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 AL356309.3-201ENST00000624132 1934 ntBASIC14.86□□□□□ -0.03
H2BFMP0C1H6 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 RBM17P3-201ENST00000417687 1192 ntBASIC14.86□□□□□ -0.03
H2BFMP0C1H6 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 NKAPP1-205ENST00000585790 367 ntBASIC14.86□□□□□ -0.03
H2BFMP0C1H6 AL732292.2-201ENST00000609649 430 ntBASIC14.86□□□□□ -0.03
H2BFMP0C1H6 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 RAB35-201ENST00000229340 2945 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
H2BFMP0C1H6 CD9-203ENST00000382518 1556 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 PPP4R3A-205ENST00000554684 4108 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 HLA-J-202ENST00000469281 1241 ntBASIC14.85□□□□□ -0.03
H2BFMP0C1H6 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 MTDHP3-201ENST00000594186 672 ntBASIC14.85□□□□□ -0.03
H2BFMP0C1H6 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 BCAS3-204ENST00000585744 2203 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 AC006538.1-201ENST00000567905 1585 ntBASIC14.85□□□□□ -0.03
H2BFMP0C1H6 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 POLR3D-202ENST00000397802 5494 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 CES4A-206ENST00000540579 1825 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
H2BFMP0C1H6 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 TINF2-208ENST00000558566 1874 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 GCK-202ENST00000345378 2421 ntTSL 2 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 ITSN1-204ENST00000381285 6107 ntTSL 5 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 PC-204ENST00000524491 1714 ntTSL 2 BASIC14.84□□□□□ -0.03
H2BFMP0C1H6 SLC1A6-208ENST00000598504 2987 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms