Protein–RNA interactions for Protein: P08253

MMP2, 72 kDa type IV collagenase, humanhuman

Predictions only

Length 660 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP2P08253 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.86■□□□□ 0.29
MMP2P08253 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
MMP2P08253 AC005052.1-201ENST00000625181 2492 ntBASIC16.86■□□□□ 0.29
MMP2P08253 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC16.86■□□□□ 0.29
MMP2P08253 TCF3-204ENST00000453954 3585 ntTSL 5 BASIC16.86■□□□□ 0.29
MMP2P08253 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
MMP2P08253 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP2P08253 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 GPAA1P2-202ENST00000606848 1787 ntBASIC16.85■□□□□ 0.29
MMP2P08253 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.85■□□□□ 0.29
MMP2P08253 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 CD99L2-202ENST00000355149 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
MMP2P08253 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 AC074386.1-202ENST00000463561 864 ntBASIC16.85■□□□□ 0.29
MMP2P08253 CDKN2A-209ENST00000498628 926 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
MMP2P08253 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC16.85■□□□□ 0.29
MMP2P08253 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC16.85■□□□□ 0.29
MMP2P08253 COX5A-206ENST00000568783 571 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP2P08253 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC16.85■□□□□ 0.29
MMP2P08253 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.85■□□□□ 0.29
MMP2P08253 AL009183.1-201ENST00000603760 355 ntBASIC16.85■□□□□ 0.29
MMP2P08253 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC16.85■□□□□ 0.29
MMP2P08253 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 HSD17B6-203ENST00000554150 1547 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
MMP2P08253 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC16.85■□□□□ 0.29
MMP2P08253 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
MMP2P08253 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 MIER1-205ENST00000371014 1728 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MMP2P08253 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
MMP2P08253 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 PMS2P4-201ENST00000412466 1052 ntBASIC16.84■□□□□ 0.29
MMP2P08253 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 AL109741.1-201ENST00000432195 403 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 SLC22A18-206ENST00000449793 1225 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 SMN2-210ENST00000511812 867 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 AP002472.1-201ENST00000577490 586 ntBASIC16.84■□□□□ 0.29
MMP2P08253 CD7-202ENST00000578509 925 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP2P08253 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC16.84■□□□□ 0.29
MMP2P08253 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 AC006064.2-201ENST00000501075 2196 ntTSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.84■□□□□ 0.29
MMP2P08253 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 CBS-202ENST00000359624 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 CBSL-203ENST00000618024 2353 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
MMP2P08253 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
MMP2P08253 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
MMP2P08253 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
MMP2P08253 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
MMP2P08253 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
MMP2P08253 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms