Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14□□□□□ -0.17
CTSDP07339 HLA-DQB2-231ENST00000435145 2026 ntBASIC14□□□□□ -0.17
CTSDP07339 ALDH3A1-212ENST00000494157 1572 ntTSL 3 BASIC14□□□□□ -0.17
CTSDP07339 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 FAM222B-202ENST00000452648 2836 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
CTSDP07339 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
CTSDP07339 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 EXT2-210ENST00000533608 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 KRT8P49-201ENST00000604166 1432 ntBASIC13.99□□□□□ -0.17
CTSDP07339 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 COL4A1-204ENST00000543140 2547 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 LRRC57-204ENST00000563454 2407 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 TERF1P1-201ENST00000311003 1181 ntBASIC13.99□□□□□ -0.17
CTSDP07339 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 DANCR-204ENST00000444958 709 ntTSL 3 BASIC13.99□□□□□ -0.17
CTSDP07339 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC13.99□□□□□ -0.17
CTSDP07339 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 P4HB-223ENST00000576390 439 ntTSL 4 BASIC13.99□□□□□ -0.17
CTSDP07339 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC13.99□□□□□ -0.17
CTSDP07339 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC13.99□□□□□ -0.17
CTSDP07339 AC073592.5-201ENST00000624854 528 ntBASIC13.99□□□□□ -0.17
CTSDP07339 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 AC006277.1-201ENST00000624348 1610 ntBASIC13.99□□□□□ -0.17
CTSDP07339 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC13.99□□□□□ -0.17
CTSDP07339 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
CTSDP07339 TIGAR-201ENST00000179259 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
CTSDP07339 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
CTSDP07339 SLC27A5-201ENST00000263093 2361 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
CTSDP07339 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CTSDP07339 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.98□□□□□ -0.17
CTSDP07339 AMT-233ENST00000636522 1620 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 AP002414.1-201ENST00000391405 1147 ntBASIC13.98□□□□□ -0.17
CTSDP07339 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC13.98□□□□□ -0.17
CTSDP07339 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 KRT18P57-201ENST00000443599 1254 ntBASIC13.98□□□□□ -0.17
CTSDP07339 YBX1P2-201ENST00000489612 999 ntBASIC13.98□□□□□ -0.17
CTSDP07339 PPOX-219ENST00000544598 813 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC13.98□□□□□ -0.17
CTSDP07339 C18orf21-207ENST00000610527 1059 ntTSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 C18orf21-208ENST00000618334 856 ntTSL 3 BASIC13.98□□□□□ -0.17
CTSDP07339 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
CTSDP07339 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 LGALS8-AS1-201ENST00000487567 1457 ntBASIC13.98□□□□□ -0.17
CTSDP07339 GGT4P-201ENST00000623672 1708 ntBASIC13.98□□□□□ -0.17
CTSDP07339 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
CTSDP07339 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
CTSDP07339 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms