Protein–RNA interactions for Protein: P02538

KRT6A, Keratin, type II cytoskeletal 6A, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT6AP02538 AC110813.1-201ENST00000507934 2209 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 AC079328.2-201ENST00000561241 3354 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 PRELID1P1-202ENST00000567272 903 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 AC006538.1-201ENST00000567905 1585 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC16.32■□□□□ 0.2
KRT6AP02538 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.32■□□□□ 0.2
KRT6AP02538 AC013467.2-201ENST00000605472 835 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 AL117335.1-203ENST00000619200 948 ntTSL 5 BASIC16.32■□□□□ 0.2
KRT6AP02538 AL139011.1-202ENST00000642063 584 ntBASIC16.32■□□□□ 0.2
KRT6AP02538 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT6AP02538 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
KRT6AP02538 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
KRT6AP02538 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 PC-204ENST00000524491 1714 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 AC006277.1-201ENST00000624348 1610 ntBASIC16.31■□□□□ 0.2
KRT6AP02538 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6AP02538 TOP3BP1-201ENST00000420768 1380 ntBASIC16.31■□□□□ 0.2
KRT6AP02538 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
KRT6AP02538 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6AP02538 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.31■□□□□ 0.2
KRT6AP02538 PRR29-207ENST00000580752 458 ntTSL 3 BASIC16.31■□□□□ 0.2
KRT6AP02538 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 MTDHP4-201ENST00000600287 670 ntBASIC16.31■□□□□ 0.2
KRT6AP02538 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 C9orf172-201ENST00000436881 4387 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
KRT6AP02538 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
KRT6AP02538 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.31■□□□□ 0.2
KRT6AP02538 SYT6-201ENST00000369547 4369 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
KRT6AP02538 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 WT1-209ENST00000530998 2421 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 TRIM67-202ENST00000444294 9320 ntAPPRIS ALT1 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 CCDC43-202ENST00000457422 2058 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 AC103702.1-201ENST00000548801 2630 ntBASIC16.3■□□□□ 0.2
KRT6AP02538 ABCB10-201ENST00000344517 3857 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT6AP02538 DFFB-203ENST00000341385 572 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.3■□□□□ 0.2
KRT6AP02538 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 FGFR3P6-201ENST00000457012 610 ntBASIC16.3■□□□□ 0.2
KRT6AP02538 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6AP02538 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6AP02538 SART3-203ENST00000546611 1184 ntBASIC16.3■□□□□ 0.2
KRT6AP02538 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.3■□□□□ 0.2
KRT6AP02538 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 RNF151-202ENST00000569210 853 ntTSL 2 BASIC16.3■□□□□ 0.2
KRT6AP02538 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC16.3■□□□□ 0.2
KRT6AP02538 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 THSD1-202ENST00000349258 3189 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 PHGDH-202ENST00000369409 1882 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 ELMSAN1-201ENST00000286523 8091 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
KRT6AP02538 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 42.7 ms