Protein–RNA interactions for Protein: O95741

CPNE6, Copine-6, humanhuman

Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE6O95741 CITED2-204ENST00000618718 901 ntTSL 2 BASIC16.52■□□□□ 0.24
CPNE6O95741 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.52■□□□□ 0.24
CPNE6O95741 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE6O95741 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CPNE6O95741 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
CPNE6O95741 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
CPNE6O95741 SESN1-204ENST00000436639 3509 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE6O95741 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE6O95741 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE6O95741 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE6O95741 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.52■□□□□ 0.23
CPNE6O95741 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC16.52■□□□□ 0.23
CPNE6O95741 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
CPNE6O95741 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
CPNE6O95741 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE6O95741 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC16.52■□□□□ 0.23
CPNE6O95741 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.23
CPNE6O95741 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 PLTP-202ENST00000372420 1530 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.51■□□□□ 0.23
CPNE6O95741 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 AL513480.1-201ENST00000451731 511 ntBASIC16.51■□□□□ 0.23
CPNE6O95741 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.51■□□□□ 0.23
CPNE6O95741 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC16.51■□□□□ 0.23
CPNE6O95741 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 AP000344.2-201ENST00000512987 629 ntBASIC16.51■□□□□ 0.23
CPNE6O95741 AP002472.1-201ENST00000577490 586 ntBASIC16.51■□□□□ 0.23
CPNE6O95741 AC010776.2-201ENST00000588946 1081 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
CPNE6O95741 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 GPAT2-201ENST00000359548 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.51■□□□□ 0.23
CPNE6O95741 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
CPNE6O95741 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE6O95741 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE6O95741 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.5■□□□□ 0.23
CPNE6O95741 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE6O95741 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.5■□□□□ 0.23
CPNE6O95741 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE6O95741 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 AC087163.2-201ENST00000457299 853 ntBASIC16.5■□□□□ 0.23
CPNE6O95741 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE6O95741 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE6O95741 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE6O95741 COQ7-208ENST00000568985 714 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CPNE6O95741 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE6O95741 ACTL9-202ENST00000612068 1252 ntBASIC16.5■□□□□ 0.23
CPNE6O95741 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE6O95741 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 GMPPA-202ENST00000341142 1524 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE6O95741 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE6O95741 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE6O95741 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE6O95741 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 TMUB2-212ENST00000589785 1918 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CPNE6O95741 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 ABHD11-203ENST00000395147 812 ntTSL 3 BASIC16.49■□□□□ 0.23
CPNE6O95741 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
CPNE6O95741 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC16.49■□□□□ 0.23
CPNE6O95741 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPNE6O95741 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE6O95741 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE6O95741 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CPNE6O95741 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 41.9 ms