Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 ZCCHC18-203ENST00000537356 2907 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
TRIM3O75382 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 NDRG4-202ENST00000356752 1375 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 THAP3-201ENST00000054650 1366 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC15.73■□□□□ 0.11
TRIM3O75382 RIC8A-201ENST00000325207 2702 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
TRIM3O75382 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 CPZ-203ENST00000382480 2538 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 ANHX-201ENST00000419717 1765 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 WTAP-205ENST00000614346 1623 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 FLJ31104-201ENST00000500093 2289 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 SLC4A1APP2-201ENST00000424054 1259 ntBASIC15.72■□□□□ 0.11
TRIM3O75382 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM3O75382 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 AC108751.1-201ENST00000490852 363 ntBASIC15.72■□□□□ 0.11
TRIM3O75382 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC15.72■□□□□ 0.11
TRIM3O75382 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 AC008992.1-201ENST00000591132 446 ntTSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 AC002985.2-201ENST00000601106 957 ntTSL 4 BASIC15.72■□□□□ 0.11
TRIM3O75382 CAND2-206ENST00000626378 333 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
TRIM3O75382 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
TRIM3O75382 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
TRIM3O75382 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 KNOP1-205ENST00000568230 1311 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 CENPN-202ENST00000305850 2481 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 OS9-205ENST00000413095 1660 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM3O75382 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC15.71■□□□□ 0.11
TRIM3O75382 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC15.71■□□□□ 0.11
TRIM3O75382 AC027601.4-201ENST00000611259 610 ntBASIC15.71■□□□□ 0.11
TRIM3O75382 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC15.71■□□□□ 0.11
TRIM3O75382 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
TRIM3O75382 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
TRIM3O75382 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM3O75382 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM3O75382 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC15.71■□□□□ 0.1
TRIM3O75382 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC15.71■□□□□ 0.1
TRIM3O75382 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
TRIM3O75382 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
TRIM3O75382 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC15.7■□□□□ 0.1
TRIM3O75382 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC15.7■□□□□ 0.1
TRIM3O75382 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
TRIM3O75382 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 36.8 ms