Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EXTL3O43909 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 CETN1-201ENST00000327228 1758 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
EXTL3O43909 IFNL1-201ENST00000333625 857 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
EXTL3O43909 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 RPSAP43-201ENST00000402237 625 ntBASIC18.18■□□□□ 0.5
EXTL3O43909 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 GGCT-205ENST00000409436 954 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 AC109635.5-201ENST00000533593 962 ntBASIC18.18■□□□□ 0.5
EXTL3O43909 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 AL009183.1-201ENST00000603760 355 ntBASIC18.18■□□□□ 0.5
EXTL3O43909 HOTTIP_1.1-201ENST00000620415 57 ntBASIC18.18■□□□□ 0.5
EXTL3O43909 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC18.18■□□□□ 0.5
EXTL3O43909 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
EXTL3O43909 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC18.18■□□□□ 0.5
EXTL3O43909 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.18■□□□□ 0.5
EXTL3O43909 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC18.18■□□□□ 0.5
EXTL3O43909 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.18■□□□□ 0.5
EXTL3O43909 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
EXTL3O43909 NOX4-207ENST00000525196 1555 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
EXTL3O43909 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 CEP76-202ENST00000423709 2197 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 PIGT-207ENST00000543458 2037 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 ANAPC11-201ENST00000344877 918 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 MRPL9-202ENST00000368830 1296 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 MEAF6-202ENST00000373073 603 ntTSL 3 BASIC18.17■□□□□ 0.5
EXTL3O43909 GLIPR1L1-202ENST00000378695 885 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 YBX2P1-201ENST00000394192 760 ntBASIC18.17■□□□□ 0.5
EXTL3O43909 GPX1P2-201ENST00000429271 606 ntBASIC18.17■□□□□ 0.5
EXTL3O43909 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC18.17■□□□□ 0.5
EXTL3O43909 KBTBD4-203ENST00000525720 980 ntTSL 3 BASIC18.17■□□□□ 0.5
EXTL3O43909 ANAPC11-213ENST00000577747 672 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC18.17■□□□□ 0.5
EXTL3O43909 MTDHP5-201ENST00000598980 586 ntBASIC18.17■□□□□ 0.5
EXTL3O43909 UBE3D-208ENST00000626828 114 ntTSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 NR1H3-204ENST00000407404 1330 ntTSL 5 BASIC18.17■□□□□ 0.5
EXTL3O43909 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
EXTL3O43909 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC18.17■□□□□ 0.5
EXTL3O43909 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 WAC-202ENST00000347934 2839 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 ARID5A-201ENST00000357485 2188 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 ANKRD23-203ENST00000418232 2156 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 GABARAPL1-205ENST00000539170 1700 ntTSL 3 BASIC18.16■□□□□ 0.5
EXTL3O43909 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.16■□□□□ 0.5
EXTL3O43909 RPS8P6-201ENST00000426177 609 ntBASIC18.16■□□□□ 0.5
EXTL3O43909 FIS1-203ENST00000442303 631 ntTSL 3 BASIC18.16■□□□□ 0.5
EXTL3O43909 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 AC112482.1-201ENST00000492080 688 ntBASIC18.16■□□□□ 0.5
EXTL3O43909 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.16■□□□□ 0.5
EXTL3O43909 AC021097.1-201ENST00000607902 574 ntBASIC18.16■□□□□ 0.5
EXTL3O43909 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
EXTL3O43909 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms