Protein–RNA interactions for Protein: O43295

SRGAP3, SLIT-ROBO Rho GTPase-activating protein 3, humanhuman

Predictions only

Length 1,099 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3O43295 MAGEF1-201ENST00000317897 1636 ntAPPRIS P1 BASIC20.79■□□□□ 0.92
SRGAP3O43295 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 YBX1P5-201ENST00000509441 847 ntBASIC20.79■□□□□ 0.92
SRGAP3O43295 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.79■□□□□ 0.92
SRGAP3O43295 MARVELD3-206ENST00000567566 850 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 MIR4469-201ENST00000583919 79 ntBASIC20.79■□□□□ 0.92
SRGAP3O43295 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC20.79■□□□□ 0.92
SRGAP3O43295 CITED2-204ENST00000618718 901 ntTSL 2 BASIC20.79■□□□□ 0.92
SRGAP3O43295 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC20.79■□□□□ 0.92
SRGAP3O43295 CCT6A-202ENST00000335503 2529 ntTSL 5 BASIC20.79■□□□□ 0.92
SRGAP3O43295 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SRGAP3O43295 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 PKD1P1-201ENST00000458669 6805 ntBASIC20.79■□□□□ 0.92
SRGAP3O43295 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SRGAP3O43295 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC20.78■□□□□ 0.92
SRGAP3O43295 AC010619.2-201ENST00000595815 1421 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 TLE2-204ENST00000455444 2253 ntTSL 5 BASIC20.78■□□□□ 0.92
SRGAP3O43295 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 LINC02167-203ENST00000566900 1489 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SRGAP3O43295 MIR1233-2-201ENST00000408138 82 ntBASIC20.78■□□□□ 0.92
SRGAP3O43295 MIR1233-1-201ENST00000408722 82 ntBASIC20.78■□□□□ 0.92
SRGAP3O43295 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 AL391069.2-202ENST00000447795 622 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC20.78■□□□□ 0.92
SRGAP3O43295 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
SRGAP3O43295 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC20.78■□□□□ 0.92
SRGAP3O43295 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC20.78■□□□□ 0.92
SRGAP3O43295 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC20.78■□□□□ 0.92
SRGAP3O43295 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC20.78■□□□□ 0.92
SRGAP3O43295 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 ELL2P1-201ENST00000413990 1906 ntBASIC20.78■□□□□ 0.92
SRGAP3O43295 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC20.78■□□□□ 0.92
SRGAP3O43295 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC20.78■□□□□ 0.92
SRGAP3O43295 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SRGAP3O43295 HLA-A-202ENST00000376806 1854 ntBASIC20.77■□□□□ 0.92
SRGAP3O43295 DUOXA2-201ENST00000323030 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 SSBP3-205ENST00000417664 1666 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 IRF5-215ENST00000619830 1652 ntTSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 AC006538.1-201ENST00000567905 1585 ntBASIC20.77■□□□□ 0.92
SRGAP3O43295 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 DOC2B-203ENST00000613549 6048 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 TM4SF19-204ENST00000454715 1061 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 CTBP1-AS2-204ENST00000514984 533 ntTSL 4 BASIC20.77■□□□□ 0.92
SRGAP3O43295 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 IGHV3OR16-6-201ENST00000568775 360 ntBASIC20.77■□□□□ 0.92
SRGAP3O43295 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
SRGAP3O43295 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC20.77■□□□□ 0.92
SRGAP3O43295 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SRGAP3O43295 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC20.77■□□□□ 0.91
SRGAP3O43295 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.91
SRGAP3O43295 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.77■□□□□ 0.91
SRGAP3O43295 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.91
SRGAP3O43295 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC20.77■□□□□ 0.91
SRGAP3O43295 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
SRGAP3O43295 AC009053.2-201ENST00000563701 2365 ntBASIC20.77■□□□□ 0.91
SRGAP3O43295 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SRGAP3O43295 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SRGAP3O43295 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 51.4 ms