Protein–RNA interactions for Protein: O14646

CHD1, Chromodomain-helicase-DNA-binding protein 1, humanhuman

Predictions only

Length 1,710 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1O14646 REEP1-202ENST00000453231 940 ntTSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC26.59■■□□□ 1.85
CHD1O14646 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 PAQR4-201ENST00000293978 2644 ntTSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC26.59■■□□□ 1.85
CHD1O14646 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC26.59■■□□□ 1.85
CHD1O14646 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC26.59■■□□□ 1.85
CHD1O14646 VMO1-203ENST00000416307 712 ntTSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC26.59■■□□□ 1.85
CHD1O14646 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC26.59■■□□□ 1.85
CHD1O14646 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 Z97205.2-201ENST00000564697 1639 ntBASIC26.58■■□□□ 1.85
CHD1O14646 WAS-201ENST00000376701 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 SFRP2-201ENST00000274063 2032 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 ZBP1-202ENST00000395822 2073 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD1O14646 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 U82695.1-202ENST00000428676 700 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD1O14646 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD1O14646 AC006487.1-201ENST00000514506 1221 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD1O14646 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD1O14646 FADS2-212ENST00000522639 360 ntTSL 5 BASIC26.58■■□□□ 1.85
CHD1O14646 MBP-227ENST00000526111 581 ntTSL 4 BASIC26.58■■□□□ 1.85
CHD1O14646 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD1O14646 AC008011.2-201ENST00000538113 792 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD1O14646 FADS2-215ENST00000574708 385 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD1O14646 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC26.58■■□□□ 1.85
CHD1O14646 AL022328.3-201ENST00000607943 679 ntBASIC26.58■■□□□ 1.85
CHD1O14646 GRN-222ENST00000639447 1314 ntTSL 2 BASIC26.58■■□□□ 1.85
CHD1O14646 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC26.58■■□□□ 1.85
CHD1O14646 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHD1O14646 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 SNX33P1-201ENST00000592116 1762 ntBASIC26.57■■□□□ 1.84
CHD1O14646 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC26.57■■□□□ 1.84
CHD1O14646 MIR33B-201ENST00000385104 96 ntBASIC26.57■■□□□ 1.84
CHD1O14646 SOCS2P1-201ENST00000417727 557 ntBASIC26.57■■□□□ 1.84
CHD1O14646 HIST2H2BC-201ENST00000498492 580 ntBASIC26.57■■□□□ 1.84
CHD1O14646 AP006621.2-201ENST00000533938 284 ntTSL 3 BASIC26.57■■□□□ 1.84
CHD1O14646 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC26.57■■□□□ 1.84
CHD1O14646 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC26.57■■□□□ 1.84
CHD1O14646 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC26.57■■□□□ 1.84
CHD1O14646 MADD-208ENST00000405573 1823 ntTSL 5 BASIC26.57■■□□□ 1.84
CHD1O14646 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC26.57■■□□□ 1.84
CHD1O14646 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC26.57■■□□□ 1.84
CHD1O14646 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC26.57■■□□□ 1.84
CHD1O14646 PTK6-201ENST00000217185 2401 ntTSL 2 BASIC26.57■■□□□ 1.84
CHD1O14646 KRT8P37-201ENST00000451609 1420 ntBASIC26.57■■□□□ 1.84
CHD1O14646 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD1O14646 ARTN-209ENST00000479128 471 ntTSL 3 BASIC26.56■■□□□ 1.84
CHD1O14646 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC26.56■■□□□ 1.84
CHD1O14646 NDUFA4L2-206ENST00000556732 883 ntTSL 3 BASIC26.56■■□□□ 1.84
CHD1O14646 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD1O14646 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 LINC01660-203ENST00000618517 1859 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD1O14646 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD1O14646 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC26.56■■□□□ 1.84
CHD1O14646 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC26.56■■□□□ 1.84
CHD1O14646 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD1O14646 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHD1O14646 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 AC093525.9-201ENST00000624961 1746 ntBASIC26.55■■□□□ 1.84
CHD1O14646 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 B9D1-202ENST00000268841 755 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 AC016694.1-201ENST00000434179 700 ntBASIC26.55■■□□□ 1.84
CHD1O14646 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC26.55■■□□□ 1.84
CHD1O14646 IFI27L1-210ENST00000556381 804 ntTSL 5 BASIC26.55■■□□□ 1.84
CHD1O14646 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC26.55■■□□□ 1.84
CHD1O14646 ZNF83-215ENST00000600714 810 ntTSL 3 BASIC26.55■■□□□ 1.84
CHD1O14646 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CHD1O14646 ATP6V1D-201ENST00000216442 1845 ntAPPRIS P1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 TAGLN3-202ENST00000393917 1488 ntAPPRIS P1 TSL 5 BASIC26.55■■□□□ 1.84
CHD1O14646 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC26.55■■□□□ 1.84
CHD1O14646 FAM3B-203ENST00000398647 864 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHD1O14646 FAM3B-204ENST00000398652 1125 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms