Protein–RNA interactions for Protein: O00635

TRIM38, E3 ubiquitin-protein ligase TRIM38, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM38O00635 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 AP002414.1-201ENST00000391405 1147 ntBASIC16.94■□□□□ 0.3
TRIM38O00635 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM38O00635 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 PDPK2P-202ENST00000562415 1191 ntBASIC16.94■□□□□ 0.3
TRIM38O00635 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 WBP2-204ENST00000585462 1895 ntTSL 3 BASIC16.94■□□□□ 0.3
TRIM38O00635 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.94■□□□□ 0.3
TRIM38O00635 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
TRIM38O00635 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 SLC4A5-203ENST00000377632 3123 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 BCAR1-209ENST00000546196 1340 ntBASIC16.94■□□□□ 0.3
TRIM38O00635 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
TRIM38O00635 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 FLJ38576-201ENST00000623820 2459 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 MBOAT1-201ENST00000324607 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.93■□□□□ 0.3
TRIM38O00635 RFPL4AP1-201ENST00000530883 850 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 KRT19P2-202ENST00000557173 1012 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 AL031432.2-201ENST00000566714 459 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 AL928711.1-201ENST00000570165 459 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC16.93■□□□□ 0.3
TRIM38O00635 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC16.93■□□□□ 0.3
TRIM38O00635 ZEB1-AS1-206ENST00000606250 573 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 AC016396.2-201ENST00000562575 1417 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 SH2B3-202ENST00000538307 2062 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 ZBTB9-201ENST00000395064 2716 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 CICP6-201ENST00000457191 2729 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC16.93■□□□□ 0.3
TRIM38O00635 AL162727.3-201ENST00000635661 2787 ntBASIC16.93■□□□□ 0.3
TRIM38O00635 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC16.93■□□□□ 0.3
TRIM38O00635 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC16.93■□□□□ 0.3
TRIM38O00635 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 KCTD20-202ENST00000373731 5619 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 ADAM11-203ENST00000535346 2529 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM38O00635 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC16.92■□□□□ 0.3
TRIM38O00635 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM38O00635 CYMP-203ENST00000474680 1263 ntBASIC16.92■□□□□ 0.3
TRIM38O00635 AC093714.2-201ENST00000489626 763 ntTSL 3 BASIC16.92■□□□□ 0.3
TRIM38O00635 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM38O00635 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC16.92■□□□□ 0.3
TRIM38O00635 GGTLC5P-201ENST00000617623 998 ntBASIC16.92■□□□□ 0.3
TRIM38O00635 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC16.92■□□□□ 0.3
TRIM38O00635 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
TRIM38O00635 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 41.6 ms