Protein–RNA interactions for Protein: O00203

AP3B1, AP-3 complex subunit beta-1, humanhuman

Predictions only

Length 1,094 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP3B1O00203 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 ELK2BP-201ENST00000415014 1224 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 HCG4-201ENST00000418983 998 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 BX276092.7-202ENST00000422194 696 ntTSL 3 BASIC16.99■□□□□ 0.31
AP3B1O00203 KRT18P27-201ENST00000427733 1299 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 WDR53-204ENST00000433160 887 ntTSL 5 BASIC16.99■□□□□ 0.31
AP3B1O00203 RPS15P9-201ENST00000494093 319 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 METTL23-204ENST00000586752 904 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 FBXO4-201ENST00000281623 1682 ntAPPRIS P1 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 AC006449.5-201ENST00000610658 2098 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC16.99■□□□□ 0.31
AP3B1O00203 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 ARHGAP39-202ENST00000377307 4673 ntAPPRIS P3 TSL 5 BASIC16.99■□□□□ 0.31
AP3B1O00203 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC16.99■□□□□ 0.31
AP3B1O00203 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 AC092171.3-201ENST00000610122 2651 ntBASIC16.99■□□□□ 0.31
AP3B1O00203 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.99■□□□□ 0.31
AP3B1O00203 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.99■□□□□ 0.31
AP3B1O00203 C2orf54-203ENST00000402775 1958 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 SLC2A10-201ENST00000359271 4389 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 IQCE-212ENST00000476665 2400 ntAPPRIS ALT2 TSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.98■□□□□ 0.31
AP3B1O00203 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC16.98■□□□□ 0.31
AP3B1O00203 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC16.98■□□□□ 0.31
AP3B1O00203 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC16.98■□□□□ 0.31
AP3B1O00203 CLEC4GP1-201ENST00000596555 870 ntBASIC16.98■□□□□ 0.31
AP3B1O00203 IFNL4P1-201ENST00000607083 540 ntBASIC16.98■□□□□ 0.31
AP3B1O00203 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 MEX3A-202ENST00000532414 6124 ntAPPRIS P1 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.98■□□□□ 0.31
AP3B1O00203 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.98■□□□□ 0.31
AP3B1O00203 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 NRG1-202ENST00000356819 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.98■□□□□ 0.31
AP3B1O00203 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.98■□□□□ 0.31
AP3B1O00203 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP3B1O00203 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.97■□□□□ 0.31
AP3B1O00203 ACOT12-201ENST00000307624 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC16.97■□□□□ 0.31
AP3B1O00203 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.97■□□□□ 0.31
AP3B1O00203 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3B1O00203 AC087641.1-201ENST00000557561 1021 ntBASIC16.97■□□□□ 0.31
AP3B1O00203 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC16.97■□□□□ 0.31
AP3B1O00203 AC008667.4-201ENST00000607370 168 ntBASIC16.97■□□□□ 0.31
AP3B1O00203 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.97■□□□□ 0.31
AP3B1O00203 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC16.97■□□□□ 0.31
AP3B1O00203 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC16.97■□□□□ 0.31
AP3B1O00203 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 BCAT2-202ENST00000402551 2041 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC16.97■□□□□ 0.31
AP3B1O00203 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC16.97■□□□□ 0.31
AP3B1O00203 SEPT9-237ENST00000591198 2160 ntTSL 2 BASIC16.96■□□□□ 0.31
AP3B1O00203 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.96■□□□□ 0.31
AP3B1O00203 SAP130-202ENST00000259235 4065 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 MLLT10-203ENST00000377072 5126 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
AP3B1O00203 AC073621.1-201ENST00000392730 636 ntBASIC16.96■□□□□ 0.31
AP3B1O00203 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC16.96■□□□□ 0.31
AP3B1O00203 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms