Protein–RNA interactions for Protein: K7ERE1

TMEM256-PLSCR3, TMEM256-PLSCR3 readthrough (NMD candidate), humanhuman

Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM256-PLSCR3K7ERE1 AC138035.3-201ENST00000622706 2791 ntBASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SPCS2-201ENST00000263672 2708 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DBNDD1-202ENST00000304733 2081 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PWP1-202ENST00000541166 1722 ntTSL 2 BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 MFGE8-215ENST00000566497 1689 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ABCC6-208ENST00000622290 4941 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC090826.2-201ENST00000568496 4946 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 KRT18P29-201ENST00000397031 1267 ntBASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GLI4-207ENST00000521682 1082 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC010240.3-201ENST00000607688 395 ntBASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 WAPL-201ENST00000263070 5987 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SLC24A3-201ENST00000328041 3929 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PDZD4-201ENST00000164640 3689 ntAPPRIS P3 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 NUDT16-202ENST00000521288 6108 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PC-208ENST00000529047 1607 ntTSL 3 BASIC10.66□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AC096733.2-201ENST00000609937 1394 ntBASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CLCF1-201ENST00000312438 1844 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 JARID2-202ENST00000397311 5595 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 AFAP1-204ENST00000420658 7768 ntAPPRIS ALT1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 GGTLC1-203ENST00000335694 1046 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
TMEM256-PLSCR3K7ERE1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms