Protein–RNA interactions for Protein: C9JG80

NPIPB4, Nuclear pore complex-interacting protein family member B4, humanhuman

Predictions only

Length 1,138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB4C9JG80 PMS2P4-201ENST00000412466 1052 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 UNC93B6-202ENST00000528242 690 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 RAP1B-228ENST00000542145 1060 ntTSL 2 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 AL031432.2-201ENST00000566714 459 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 AL928711.1-201ENST00000570165 459 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 MIR4751-201ENST00000578027 74 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 AL049840.3-201ENST00000602669 611 ntBASIC14.84□□□□□ -0.03
NPIPB4C9JG80 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 ATP6AP2-225ENST00000637482 1648 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NPIPB4C9JG80 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 LAPTM4B-201ENST00000445593 3173 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC14.83□□□□□ -0.03
NPIPB4C9JG80 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PPP3CA-203ENST00000394854 4685 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PHYHD1-201ENST00000308941 1599 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 RNU1-129P-201ENST00000384064 167 ntBASIC14.83□□□□□ -0.04
NPIPB4C9JG80 CSF3-203ENST00000394148 622 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 MRPL3P1-201ENST00000400109 1033 ntBASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AC079776.4-201ENST00000511039 504 ntBASIC14.83□□□□□ -0.04
NPIPB4C9JG80 CD63-210ENST00000550776 870 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 U1.21-201ENST00000580816 167 ntBASIC14.83□□□□□ -0.04
NPIPB4C9JG80 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AC097376.2-204ENST00000609359 627 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 KDM4B-201ENST00000159111 5593 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 DOC2GP-204ENST00000639052 2548 ntBASIC14.83□□□□□ -0.04
NPIPB4C9JG80 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NPIPB4C9JG80 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 LETM2-205ENST00000519476 2240 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NPIPB4C9JG80 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.3 ms