Protein–RNA interactions for Protein: A2RUR9

CCDC144A, Coiled-coil domain-containing protein 144A, humanhuman

Predictions only

Length 1,427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144AA2RUR9 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 GMNN-201ENST00000230056 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 FAM207CP-201ENST00000443486 507 ntBASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AC098859.1-201ENST00000502915 1238 ntBASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 RN7SL204P-201ENST00000582831 262 ntBASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 TMC6-203ENST00000392467 2833 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 KAT7-213ENST00000510819 1769 ntTSL 2 BASIC23.9■■□□□ 1.42
CCDC144AA2RUR9 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 GYPC-202ENST00000356887 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 GRAMD4P3-201ENST00000621665 1669 ntBASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 AP001094.4-201ENST00000579008 2176 ntBASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC23.89■■□□□ 1.42
CCDC144AA2RUR9 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 MRPS18AP1-201ENST00000414458 589 ntBASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 CCDC159-201ENST00000458408 1062 ntAPPRIS P1 TSL 5 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 HLA-J-202ENST00000469281 1241 ntBASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC23.89■■□□□ 1.41
CCDC144AA2RUR9 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 PCDHB18P-201ENST00000524813 2368 ntBASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 TSPY16P-201ENST00000449843 468 ntBASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 HLA-V-204ENST00000476601 1289 ntBASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 RNA5SP410-201ENST00000516285 106 ntBASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 CEP83-AS1-201ENST00000623122 2482 ntBASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 ANAPC2-201ENST00000323927 2632 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC23.88■■□□□ 1.41
CCDC144AA2RUR9 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 USE1-201ENST00000263897 843 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 SNHG17-203ENST00000417578 880 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 TAF8-206ENST00000472818 719 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 LY6E-204ENST00000519546 971 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 POLD4-211ENST00000539074 714 ntTSL 3 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 AC020765.3-201ENST00000613051 740 ntBASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 GPER1-207ENST00000619052 571 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 AL035456.1-201ENST00000456064 1369 ntBASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 HNF1A-212ENST00000544413 2014 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 DHRS4L2-205ENST00000543805 1334 ntTSL 5 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC23.87■■□□□ 1.41
CCDC144AA2RUR9 SLC43A1-201ENST00000278426 2598 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
Retrieved 100 of 98,524 protein–RNA pairs in 28.7 ms