Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 SPDYE13P-201ENST00000445314 798 ntBASIC18.29■□□□□ 0.52
CCDC66A2RUB6 GUSBP12-201ENST00000513727 720 ntBASIC18.29■□□□□ 0.52
CCDC66A2RUB6 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
CCDC66A2RUB6 NID2-208ENST00000617139 3827 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 LOXL3-203ENST00000409249 2431 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 MIR1224-201ENST00000408193 85 ntBASIC18.28■□□□□ 0.52
CCDC66A2RUB6 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 AC126696.3-202ENST00000570159 553 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 AC109462.3-201ENST00000573934 613 ntBASIC18.28■□□□□ 0.52
CCDC66A2RUB6 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 CMTM6-201ENST00000205636 3863 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 IRAK1-203ENST00000369980 3666 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
CCDC66A2RUB6 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 TRNT1-205ENST00000402675 1935 ntTSL 2 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 RUNDC1-201ENST00000361677 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 SBF1-201ENST00000348911 6045 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 AC125634.1-201ENST00000438758 1403 ntBASIC18.27■□□□□ 0.52
CCDC66A2RUB6 SLITRK2-202ENST00000370490 7672 ntAPPRIS P1 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 AC122714.2-201ENST00000502787 707 ntBASIC18.27■□□□□ 0.52
CCDC66A2RUB6 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 AC083849.1-201ENST00000615227 514 ntBASIC18.27■□□□□ 0.52
CCDC66A2RUB6 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
CCDC66A2RUB6 ZMIZ2-202ENST00000309315 5144 ntAPPRIS P4 TSL 2 BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC18.27■□□□□ 0.51
CCDC66A2RUB6 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 HAUS8-201ENST00000253669 1568 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 NADK2-206ENST00000506945 1437 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 MLLT10-205ENST00000377100 1136 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 RN7SL606P-201ENST00000472779 293 ntBASIC18.26■□□□□ 0.51
CCDC66A2RUB6 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 AL353801.3-201ENST00000609898 542 ntBASIC18.26■□□□□ 0.51
CCDC66A2RUB6 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 PPARD-202ENST00000337400 2041 ntTSL 5 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC18.26■□□□□ 0.51
CCDC66A2RUB6 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 34.2 ms