Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 UNC93B7-201ENST00000509439 705 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AC073648.2-201ENST00000510116 352 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AC106886.4-201ENST00000623557 2502 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AC060834.1-201ENST00000443027 2032 ntBASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 GLUL-201ENST00000311223 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 EPHA8-201ENST00000166244 4943 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 GGT7-201ENST00000336431 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 TBX5-203ENST00000405440 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC12.72□□□□□ -0.37
HLA-DRB4X5D2U9 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 PAM-206ENST00000438793 5432 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 CHRNE-201ENST00000293780 2455 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC092053.1-201ENST00000605787 1936 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 MYB-242ENST00000618728 3545 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC021087.4-201ENST00000563761 564 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 PNMT-203ENST00000581428 677 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 SDCCAG3P1-201ENST00000589292 1150 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 BIRC5-207ENST00000590449 568 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC006557.2-201ENST00000592985 1240 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AL121912.1-201ENST00000603683 238 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC064862.7-201ENST00000604520 867 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 AC025062.2-201ENST00000605477 670 ntBASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 STX3-203ENST00000529177 1571 ntTSL 2 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 PGR-209ENST00000617858 2816 ntTSL 5 BASIC12.71□□□□□ -0.37
HLA-DRB4X5D2U9 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 FRMD8P1-201ENST00000440433 1524 ntBASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 GCLM-201ENST00000370238 4857 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 THAP8-201ENST00000292894 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 CEP104-202ENST00000378230 6424 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 HIST1H2BN-204ENST00000612898 1723 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 RBFA-202ENST00000306735 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
HLA-DRB4X5D2U9 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC12.7□□□□□ -0.38
HLA-DRB4X5D2U9 PPP1R16B-201ENST00000299824 6251 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 60.9 ms