Protein–RNA interactions for Protein: Q9Y5H2

PCDHGA11, Protocadherin gamma-A11, humanhuman

Predictions only

Length 935 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGA11Q9Y5H2 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC16.35■□□□□ 0.21
PCDHGA11Q9Y5H2 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 RAB3IP-207ENST00000483530 1755 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 SGF29-201ENST00000317058 1153 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 PAWRP1-201ENST00000451083 565 ntBASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 AC073648.2-201ENST00000510116 352 ntBASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 AL645728.1-201ENST00000366221 2101 ntBASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 EDN3-205ENST00000395654 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC16.34■□□□□ 0.21
PCDHGA11Q9Y5H2 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 MUTYH-201ENST00000354383 1744 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 BNIP2-212ENST00000607373 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 GALNT6-201ENST00000356317 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC16.33■□□□□ 0.21
PCDHGA11Q9Y5H2 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 GLS2-217ENST00000623608 2518 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 SH2B1-203ENST00000359285 3033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 LINC00895-201ENST00000629028 1637 ntBASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 AL391256.1-201ENST00000443260 1855 ntBASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 LINC00323-202ENST00000441268 2095 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGA11Q9Y5H2 RTN3-205ENST00000356000 2645 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 CD72-204ENST00000396757 2035 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGA11Q9Y5H2 PTCHD3P3-201ENST00000403073 906 ntBASIC16.32■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms