Protein–RNA interactions for Protein: Q9Y5F0

PCDHB13, Protocadherin beta-13, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB13Q9Y5F0 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 SNX19-207ENST00000528555 1506 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 BAALC-AS2-201ENST00000436771 496 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 RPL13AP23-201ENST00000480739 586 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 FCHSD1-204ENST00000519800 802 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC004672.2-201ENST00000537181 574 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AL132657.2-201ENST00000564417 358 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC005412.3-201ENST00000580309 715 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC079791.1-201ENST00000605356 973 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 TLK2-201ENST00000326270 3512 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 AC079328.2-201ENST00000561241 3354 ntBASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF561-AS1-204ENST00000587536 1799 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AC006277.1-201ENST00000624348 1610 ntBASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AL353732.1-201ENST00000569618 1459 ntBASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SRSF2-205ENST00000508921 1390 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 ENKUR-202ENST00000376363 1318 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SPOP-201ENST00000347630 2965 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 FAM185BP-201ENST00000443595 716 ntBASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SUMO2P17-202ENST00000508743 738 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 CYB561-216ENST00000582297 897 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AC022148.2-201ENST00000586176 560 ntBASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 RANBP3-201ENST00000034275 1762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 MAGEA4-206ENST00000393921 1727 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC18.6■□□□□ 0.57
PCDHB13Q9Y5F0 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 AC104109.2-201ENST00000602919 1418 ntBASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 TMEM128-202ENST00000382753 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 HYAL1-206ENST00000447605 666 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 UPF3AP2-201ENST00000457924 1132 ntBASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 AL451064.1-201ENST00000607718 471 ntBASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 AL109620.1-201ENST00000618738 1197 ntBASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 PDCD5-203ENST00000419343 1799 ntTSL 2 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC18.59■□□□□ 0.57
PCDHB13Q9Y5F0 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms