Protein–RNA interactions for Protein: Q9Y5E7

PCDHB2, Protocadherin beta-2, humanhuman

Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB2Q9Y5E7 OVOL1-203ENST00000532448 1774 ntTSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 OGFOD2-224ENST00000545612 1465 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 SPDYE9P-201ENST00000570642 692 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 AL009183.1-201ENST00000603760 355 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 SPDYE10P-202ENST00000612005 668 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 SPDYE8P-202ENST00000612377 668 ntBASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
PCDHB2Q9Y5E7 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 SMARCC2-202ENST00000347471 3839 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 PSMD5-203ENST00000373904 1538 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 PNMT-202ENST00000394246 821 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 CBR1-202ENST00000399191 838 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 TFAMP1-201ENST00000412727 736 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AC023141.5-201ENST00000458585 616 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 HLA-J-203ENST00000494367 1087 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AC093520.2-201ENST00000561830 333 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AC091167.2-201ENST00000579581 588 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 AC106028.4-201ENST00000614509 607 ntBASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 CD24-201ENST00000606017 2180 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 RBPJ-204ENST00000348160 1752 ntAPPRIS ALT1 TSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
PCDHB2Q9Y5E7 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 MAP3K8-207ENST00000542547 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 MEIS1-AS2-201ENST00000439433 690 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC079140.1-201ENST00000508039 487 ntBASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC024230.1-201ENST00000511431 889 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 UBE2V2-201ENST00000517630 612 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 DAD1-205ENST00000543337 501 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC004449.1-201ENST00000564240 433 ntBASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 RARRES2P8-201ENST00000566335 367 ntBASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC005306.1-201ENST00000587498 661 ntTSL 3 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AL161645.1-201ENST00000622716 1255 ntBASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 SYTL3-202ENST00000360448 2504 ntAPPRIS ALT1 TSL 5 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PCDHB2Q9Y5E7 AC092068.3-201ENST00000587894 2016 ntBASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.53
PCDHB2Q9Y5E7 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 AL627223.1-201ENST00000416693 442 ntBASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 RN7SL589P-201ENST00000481268 310 ntBASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC18.33■□□□□ 0.52
PCDHB2Q9Y5E7 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms