Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 SAP130-201ENST00000259234 4140 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 DEF6-201ENST00000316637 2262 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
R3HCC1Q9Y3T6 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 MROH6-201ENST00000398882 3469 ntAPPRIS P2 TSL 5 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 FES-204ENST00000414248 2327 ntTSL 2 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 SYVN1-202ENST00000307289 2841 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
R3HCC1Q9Y3T6 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 AC012615.1-201ENST00000565797 1299 ntBASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 PRELID1P1-202ENST00000567272 903 ntBASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 MIR3180-1-201ENST00000580374 94 ntBASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 MIR3180-3-201ENST00000584616 94 ntBASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 SPOCK1-202ENST00000394945 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 ACTN2-207ENST00000546208 5103 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
R3HCC1Q9Y3T6 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 NBPF15-202ENST00000488031 4535 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC078925.2-201ENST00000624013 1973 ntBASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 CYP2U1-201ENST00000332884 4944 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 KRT17P6-201ENST00000453795 1220 ntBASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 LINC00910-203ENST00000587874 544 ntTSL 4 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AL365203.3-201ENST00000609742 2057 ntBASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 RBBP8-201ENST00000327155 3288 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC126177.1-201ENST00000547829 2218 ntBASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
R3HCC1Q9Y3T6 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC19.31■□□□□ 0.68
R3HCC1Q9Y3T6 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41.3 ms